Difference between revisions of "TSS:Hg 100553.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000603592.1:0 | + | |all_trans=ENST00000340783.11:0 ENST00000603592.1:0 NM_001309427:0 NM_001309426:0 NM_001375894:0 NR_164743:0 ENST00000603640.6:37 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-1 |
|end=34895771 | |end=34895771 | ||
|end_of_center_position=34895765 | |end_of_center_position=34895765 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001309426 | |nearest_refseq=NM_001309426 | ||
|nearest_unigene=Hs.571602 | |nearest_unigene=Hs.571602 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=human | |species=human | ||
|start=34895758 | |start=34895758 | ||
|start_of_center_position=34895764 | |start_of_center_position=34895764 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000603592.1 | + | |transcript_name=ENST00000340783.11 ENST00000603592.1 NM_001309427 NM_001309426 NM_001375894 NR_164743 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_100553.1 | |tss_id=hg_100553.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=A0A0U1RRG8 A0A0U1RRK5 A6NFA0 |
}} | }} | ||
Revision as of 15:22, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 34895764 |
|---|---|
| End of the center position in the TSS region: | 34895765 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000340783.11 ENST00000603592.1 NM_001309427 NM_001309426 NM_001375894 NR_164743 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | ENST00000340783.11:0 ENST00000603592.1:0 NM_001309427:0 NM_001309426:0 NM_001375894:0 NR_164743:0 ENST00000603640.6:37 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NM_001309427 |
| Entrez ID: | 100129969 |
| Nearest Unigene: | Hs.571602 |
| Nearest Refseq: | NM_001309426 |
| Nearest Ensembl: | ENSG00000187791 |
| Gene Name: | family with sequence similarity 205 member C |
| Gene Alias: | FAM205CP |
| Gene Description: | family with sequence similarity 205 member C |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.452736 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
