Difference between revisions of "TSS:Hg 100590.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|LYB2= | |LYB2= | ||
| − | |all_trans=ENST00000396757. | + | |all_trans=ENST00000396757.6:1 ENST00000470387.5:9 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=1 | |distance=1 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-1132 |
|end=35619547 | |end=35619547 | ||
|end_of_center_position=35619545 | |end_of_center_position=35619545 | ||
|entrez_id=971 | |entrez_id=971 | ||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
| − | |gene_alias=CD72b | + | |gene_alias=CD72b|LYB2 |
|gene_description=CD72 molecule | |gene_description=CD72 molecule | ||
|gene_id=971 | |gene_id=971 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_001782 | |nearest_refseq=NM_001782 | ||
|nearest_unigene=Hs.116481 | |nearest_unigene=Hs.116481 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=35619542 | |start=35619542 | ||
|start_of_center_position=35619544 | |start_of_center_position=35619544 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000396757. | + | |transcript_name=ENST00000396757.6 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_100590.1 | |tss_id=hg_100590.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=A0A6E1WA84 |
}} | }} | ||
Revision as of 15:23, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 35619544 |
|---|---|
| End of the center position in the TSS region: | 35619545 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000396757.6 |
|---|---|
| Distance: | 1 |
| Num_trans: | 2 |
| All_trans: | ENST00000396757.6:1 ENST00000470387.5:9 |
TATA-Box annotation
| Distance to TSS: | -1132 |
|---|---|
| Nearest PromoterID: | NM_001782 |
| Entrez ID: | 971 |
| Nearest Unigene: | Hs.116481 |
| Nearest Refseq: | NM_001782 |
| Nearest Ensembl: | ENSG00000137101 |
| Gene Name: | CD72 molecule |
| Gene Alias: | CD72b |
| Gene Description: | CD72 molecule |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
