Difference between revisions of "TSS:Hg 100666.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000472085.5 | + | |all_trans=ENST00000472085.5:0 AK222582:0 AF356515:-1 AY033094:-8 ENST00000461169.1:-13 AF356875:-13 BC047737:-13 AF085236:-18 ENST00000259667.6:-34 NM_032593:-34 LF206440:-50 MA442017:-50 ENST00000474908.5:-344 BC033538:-344 ENST00000474848.6:-346 AK309795:-476 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=44 |
|end=35815008 | |end=35815008 | ||
|end_of_center_position=35814999 | |end_of_center_position=35814999 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_032593 | |nearest_refseq=NM_032593 | ||
|nearest_unigene=Hs.70573 | |nearest_unigene=Hs.70573 | ||
| − | |num_trans= | + | |num_trans=16 |
|species=human | |species=human | ||
|start=35814988 | |start=35814988 | ||
|start_of_center_position=35814998 | |start_of_center_position=35814998 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000472085.5 | + | |transcript_name=ENST00000472085.5 AK222582 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100666.1 | |tss_id=hg_100666.1 | ||
Revision as of 15:25, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 35814998 |
|---|---|
| End of the center position in the TSS region: | 35814999 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000472085.5 AK222582 |
|---|---|
| Distance: | 0 |
| Num_trans: | 16 |
| All_trans: | ENST00000472085.5:0 AK222582:0 AF356515:-1 AY033094:-8 ENST00000461169.1:-13 AF356875:-13 BC047737:-13 AF085236:-18 ENST00000259667.6:-34 NM_032593:-34 LF206440:-50 MA442017:-50 ENST00000474908.5:-344 BC033538:-344 ENST00000474848.6:-346 AK309795:-476 |
TATA-Box annotation
| Distance to TSS: | 44 |
|---|---|
| Nearest PromoterID: | NM_032593 |
| Entrez ID: | 84681 |
| Nearest Unigene: | Hs.70573 |
| Nearest Refseq: | NM_032593 |
| Nearest Ensembl: | ENSG00000137133 |
| Gene Name: | histidine triad nucleotide binding protein 2 |
| Gene Alias: | HIT-17 |
| Gene Description: | histidine triad nucleotide binding protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.78607 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
