Difference between revisions of "TSS:Hg 10073.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000618051.1:134 | + | |all_trans=ENST00000618051.1:134 NR_146199:134 NR_146201:134 NR_146200:134 AK128074:360 ENST00000411708.1:469 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=134 | |distance=134 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-154 |
|end=7389928 | |end=7389928 | ||
|end_of_center_position=7389908 | |end_of_center_position=7389908 | ||
| − | |entrez_id= | + | |entrez_id=102725193 |
|gc_percent=0.572139 | |gc_percent=0.572139 | ||
| − | |gene_alias= | + | |gene_alias=- |
| − | |gene_description= | + | |gene_description=uncharacterized LOC102725193 |
| − | |gene_name= | + | |gene_id=102725193 |
| − | |gene_type= | + | |gene_name=CAMTA1 antisense RNA 2 |
| − | |nearest_ensembl= | + | |gene_source=HGNC:40855 |
| − | |nearest_promoter_id= | + | |gene_symbol=CAMTA1-AS2 |
| − | |nearest_refseq= | + | |gene_synonyms= |
| − | |nearest_unigene=Hs. | + | |gene_type=ncRNA |
| − | |num_trans= | + | |hgnc_mgi_id=HGNC:40855 |
| + | |nearest_ensembl=ENSG00000237728 | ||
| + | |nearest_promoter_id=NR_146201 | ||
| + | |nearest_refseq=NR_146199 | ||
| + | |nearest_unigene=Hs.666120 | ||
| + | |num_trans=6 | ||
|species=human | |species=human | ||
|start=7389887 | |start=7389887 | ||
|start_of_center_position=7389907 | |start_of_center_position=7389907 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000618051.1 | + | |transcript_name=ENST00000618051.1 NR_146199 NR_146201 NR_146200 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_10073.1 | |tss_id=hg_10073.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 15:26, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 7389907 |
|---|---|
| End of the center position in the TSS region: | 7389908 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000618051.1 NR_146199 NR_146201 NR_146200 |
|---|---|
| Distance: | 134 |
| Num_trans: | 6 |
| All_trans: | ENST00000618051.1:134 NR_146199:134 NR_146201:134 NR_146200:134 AK128074:360 ENST00000411708.1:469 |
TATA-Box annotation
| Distance to TSS: | -154 |
|---|---|
| Nearest PromoterID: | NR_146201 |
| Entrez ID: | 102725193 |
| Nearest Unigene: | Hs.666120 |
| Nearest Refseq: | NR_146199 |
| Nearest Ensembl: | ENSG00000237728 |
| Gene Name: | CAMTA1 antisense RNA 2 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC102725193 |
| Gene Type: | ncRNA |
| CpG%: | 0.02 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
