Difference between revisions of "TSS:Hg 100740.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|PRMT11= | |PRMT11= | ||
| − | |all_trans= | + | |all_trans=ENST00000432825.7:0 NM_012166:0 ENST00000541607.1:18 ENST00000276960.7:44 AF176705:115 AF174598:115 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=1 |
|end=37576392 | |end=37576392 | ||
|end_of_center_position=37576380 | |end_of_center_position=37576380 | ||
|entrez_id=26267 | |entrez_id=26267 | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
| − | |gene_alias=FBX10 | + | |gene_alias=FBX10|PRMT11 |
|gene_description=F-box protein 10 | |gene_description=F-box protein 10 | ||
|gene_id=26267 | |gene_id=26267 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_012166 | |nearest_refseq=NM_012166 | ||
|nearest_unigene=Hs.709527 | |nearest_unigene=Hs.709527 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=37576366 | |start=37576366 | ||
|start_of_center_position=37576379 | |start_of_center_position=37576379 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-78(GCTTTTATGCGC,+,0.00) |
| − | |transcript_name= | + | |transcript_name=ENST00000432825.7 NM_012166 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100740.1 | |tss_id=hg_100740.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q9UK96 |
}} | }} | ||
Revision as of 15:26, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 37576379 |
|---|---|
| End of the center position in the TSS region: | 37576380 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000432825.7 NM_012166 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | ENST00000432825.7:0 NM_012166:0 ENST00000541607.1:18 ENST00000276960.7:44 AF176705:115 AF174598:115 |
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NM_012166 |
| Entrez ID: | 26267 |
| Nearest Unigene: | Hs.709527 |
| Nearest Refseq: | NM_012166 |
| Nearest Ensembl: | ENSG00000147912 |
| Gene Name: | F-box protein 10 |
| Gene Alias: | FBX10 |
| Gene Description: | F-box protein 10 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -78(GCTTTTATGCGC,+,0.00) |
