Difference between revisions of "TSS:Hg 100807.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000625062.4:0 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=-4069 | |distance_to_tss=-4069 | ||
|end=69311140 | |end=69311140 | ||
| Line 10: | Line 11: | ||
|gene_alias=LINC00586 | |gene_alias=LINC00586 | ||
|gene_description=BRAF-activated non-protein coding RNA | |gene_description=BRAF-activated non-protein coding RNA | ||
| − | |gene_name=BANCR | + | |gene_id= |
| + | |gene_name=BRAF-activated non-protein coding RNA | ||
| + | |gene_source=HGNC:43877 | ||
| + | |gene_symbol=BANCR | ||
| + | |gene_synonyms=LINC00586 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| − | |nearest_ensembl= | + | |hgnc_mgi_id=HGNC:43877 |
| + | |nearest_ensembl=ENSG00000278910 | ||
|nearest_promoter_id=NR_047671 | |nearest_promoter_id=NR_047671 | ||
|nearest_refseq=NR_047671 | |nearest_refseq=NR_047671 | ||
|nearest_unigene=Hs.49768 | |nearest_unigene=Hs.49768 | ||
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
|start=69311109 | |start=69311109 | ||
|start_of_center_position=69311124 | |start_of_center_position=69311124 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000625062.4 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_100807.1 | |tss_id=hg_100807.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 15:28, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 69311124 |
|---|---|
| End of the center position in the TSS region: | 69311125 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000625062.4 |
|---|---|
| Distance: | 0 |
| Num_trans: | 1 |
| All_trans: | ENST00000625062.4:0 |
TATA-Box annotation
| Distance to TSS: | -4069 |
|---|---|
| Nearest PromoterID: | NR_047671 |
| Entrez ID: | 100885775 |
| Nearest Unigene: | Hs.49768 |
| Nearest Refseq: | NR_047671 |
| Nearest Ensembl: | ENSG00000278910 |
| Gene Name: | BRAF-activated non-protein coding RNA |
| Gene Alias: | LINC00586 |
| Gene Description: | BRAF-activated non-protein coding RNA |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.482587 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
