Difference between revisions of "TSS:Hg 100824.1"
From referenceTSS
| Line 5: | Line 5: | ||
|X11A= | |X11A= | ||
|X11ALPHA= | |X11ALPHA= | ||
| − | |all_trans= | + | |all_trans=ENST00000265381.7:83 NM_001163:83 AF047347:148 AF029106:173 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.175 | |cpg_percent=0.175 | ||
| − | |distance= | + | |distance=83 |
| − | |distance_to_tss=- | + | |distance_to_tss=-112 |
|end=69672512 | |end=69672512 | ||
|end_of_center_position=69672483 | |end_of_center_position=69672483 | ||
|entrez_id=320 | |entrez_id=320 | ||
|gc_percent=0.810945 | |gc_percent=0.810945 | ||
| − | |gene_alias=D9S411E | + | |gene_alias=D9S411E|LIN10|MINT1|X11|X11A|X11ALPHA |
|gene_description=amyloid beta precursor protein binding family A member 1 | |gene_description=amyloid beta precursor protein binding family A member 1 | ||
|gene_id=320 | |gene_id=320 | ||
| Line 27: | Line 27: | ||
|nearest_refseq=NM_001163 | |nearest_refseq=NM_001163 | ||
|nearest_unigene=Hs.171939 | |nearest_unigene=Hs.171939 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=69672453 | |start=69672453 | ||
|start_of_center_position=69672482 | |start_of_center_position=69672482 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=NM_001163 | + | |transcript_name=ENST00000265381.7 NM_001163 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100824.1 | |tss_id=hg_100824.1 | ||
Revision as of 15:29, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 69672482 |
|---|---|
| End of the center position in the TSS region: | 69672483 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000265381.7 NM_001163 |
|---|---|
| Distance: | 83 |
| Num_trans: | 4 |
| All_trans: | ENST00000265381.7:83 NM_001163:83 AF047347:148 AF029106:173 |
TATA-Box annotation
| Distance to TSS: | -112 |
|---|---|
| Nearest PromoterID: | NM_001163 |
| Entrez ID: | 320 |
| Nearest Unigene: | Hs.171939 |
| Nearest Refseq: | NM_001163 |
| Nearest Ensembl: | ENSG00000107282 |
| Gene Name: | amyloid beta precursor protein binding family A member 1 |
| Gene Alias: | D9S411E |
| Gene Description: | amyloid beta precursor protein binding family A member 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.175 |
| GC%: | 0.810945 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
