Difference between revisions of "TSS:Hg 100900.1"
From referenceTSS
| Line 4: | Line 4: | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance= | + | |distance=NA |
| − | |distance_to_tss=- | + | |distance_to_tss=-42170 |
|end=71163804 | |end=71163804 | ||
|end_of_center_position=71163792 | |end_of_center_position=71163792 | ||
|entrez_id=80036 | |entrez_id=80036 | ||
|gc_percent=0.378109 | |gc_percent=0.378109 | ||
| − | |gene_alias=GON-2 | + | |gene_alias=GON-2|LTRPC3|MLSN2 |
|gene_description=transient receptor potential cation channel subfamily M member 3 | |gene_description=transient receptor potential cation channel subfamily M member 3 | ||
|gene_name=TRPM3 | |gene_name=TRPM3 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000083067 | |nearest_ensembl=ENSG00000083067 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001366151 |
|nearest_refseq=NM_020952 | |nearest_refseq=NM_020952 | ||
|nearest_unigene=Hs.47288 | |nearest_unigene=Hs.47288 | ||
| Line 23: | Line 23: | ||
|start_of_center_position=71163791 | |start_of_center_position=71163791 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=37(CCTTTAATAGTA,+,0.00) |
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Revision as of 15:30, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 71163791 |
|---|---|
| End of the center position in the TSS region: | 71163792 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | NA |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | -42170 |
|---|---|
| Nearest PromoterID: | NM_001366151 |
| Entrez ID: | 80036 |
| Nearest Unigene: | Hs.47288 |
| Nearest Refseq: | NM_020952 |
| Nearest Ensembl: | ENSG00000083067 |
| Gene Name: | TRPM3 |
| Gene Alias: | GON-2 |
| Gene Description: | transient receptor potential cation channel subfamily M member 3 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.378109 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 37(CCTTTAATAGTA,+,0.00) |
