Difference between revisions of "TSS:Hg 10097.1"
From referenceTSS
| Line 3: | Line 3: | ||
|MIG6= | |MIG6= | ||
|RALT= | |RALT= | ||
| − | |all_trans=ENST00000377482. | + | |all_trans=ENST00000377482.10:0 NM_018948:0 AK096149:0 ENST00000469499.5:5 ENST00000487559.1:5 BC025337:5 AK315718:13 ENST00000474874.5:18 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=0 |
|end=8026318 | |end=8026318 | ||
|end_of_center_position=8026310 | |end_of_center_position=8026310 | ||
|entrez_id=54206 | |entrez_id=54206 | ||
|gc_percent=0.761194 | |gc_percent=0.761194 | ||
| − | |gene_alias=GENE-33 | + | |gene_alias=GENE-33|MIG-6|MIG6|RALT |
|gene_description=ERBB receptor feedback inhibitor 1 | |gene_description=ERBB receptor feedback inhibitor 1 | ||
|gene_id=54206 | |gene_id=54206 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_018948 | |nearest_refseq=NM_018948 | ||
|nearest_unigene=Hs.605445 | |nearest_unigene=Hs.605445 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=human | |species=human | ||
|start=8026300 | |start=8026300 | ||
|start_of_center_position=8026309 | |start_of_center_position=8026309 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-32(CTATATATAGAG,+,0.00) |
| − | |transcript_name=ENST00000377482. | + | |transcript_name=ENST00000377482.10 NM_018948 AK096149 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10097.1 | |tss_id=hg_10097.1 | ||
Revision as of 15:32, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 8026309 |
|---|---|
| End of the center position in the TSS region: | 8026310 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000377482.10 NM_018948 AK096149 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8 |
| All_trans: | ENST00000377482.10:0 NM_018948:0 AK096149:0 ENST00000469499.5:5 ENST00000487559.1:5 BC025337:5 AK315718:13 ENST00000474874.5:18 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NM_018948 |
| Entrez ID: | 54206 |
| Nearest Unigene: | Hs.605445 |
| Nearest Refseq: | NM_018948 |
| Nearest Ensembl: | ENSG00000116285 |
| Gene Name: | ERBB receptor feedback inhibitor 1 |
| Gene Alias: | GENE-33 |
| Gene Description: | ERBB receptor feedback inhibitor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.761194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -32(CTATATATAGAG,+,0.00) |
