Difference between revisions of "TSS:Hg 101070.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000644612.1:0 NR_026668:246 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=-257 | |distance_to_tss=-257 | ||
|end=77178185 | |end=77178185 | ||
| Line 11: | Line 11: | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=VPS13A antisense RNA 1 | |gene_description=VPS13A antisense RNA 1 | ||
| − | |gene_id= | + | |gene_id= |
|gene_name=VPS13A antisense RNA 1 | |gene_name=VPS13A antisense RNA 1 | ||
|gene_source=HGNC:44167 | |gene_source=HGNC:44167 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_026668 | |nearest_refseq=NR_026668 | ||
|nearest_unigene=Hs.662256 | |nearest_unigene=Hs.662256 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=77178162 | |start=77178162 | ||
|start_of_center_position=77178173 | |start_of_center_position=77178173 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000644612.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101070.1 | |tss_id=hg_101070.1 | ||
Revision as of 15:34, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 77178173 |
|---|---|
| End of the center position in the TSS region: | 77178174 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000644612.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 2 |
| All_trans: | ENST00000644612.1:0 NR_026668:246 |
TATA-Box annotation
| Distance to TSS: | -257 |
|---|---|
| Nearest PromoterID: | NR_026668 |
| Entrez ID: | 100286938 |
| Nearest Unigene: | Hs.662256 |
| Nearest Refseq: | NR_026668 |
| Nearest Ensembl: | ENSG00000232998 |
| Gene Name: | VPS13A antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | VPS13A antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.1 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
