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Difference between revisions of "TSS:Hg 100720.1"

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|entrez_id=5079
 
|entrez_id=5079
 
|gc_percent=0.562189
 
|gc_percent=0.562189
|gene_alias=ALL3|BSAP
+
|gene_alias=ALL3{{!}}BSAP
 
|gene_description=paired box 5
 
|gene_description=paired box 5
 
|gene_id=5079
 
|gene_id=5079

Revision as of 16:23, 15 June 2021

Basic information about the TSS


TSS ID:hg_100720.1
Species:human
Chr:chr9
TSS Classification:yes
Start:37034283
End:37034300
Strand:-
TSS Score:1
Start of the center position in the TSS region:37034291
End of the center position in the TSS region:37034292



Gene and protein annotation


Transcript_name:ENST00000358127.9 ENST00000377852.7 ENST00000523241.6 NM_001280548 NM_001280556 NM_001280547 NR_104000 NM_016734 NM_001280550 NM_001280554 NM_001280553 NM_001280552 NM_001280551 NM_001280549 NM_001280555 NR_103999
Distance:16
GeneID:5079
HGNC/MGI_ID:HGNC:8619
UniProt_ID:E7EQT0 E7ES87 Q02548
Gene_name:paired box 5
Gene_symbol:PAX5
Gene_synonyms:BSAP
Gene_source:HGNC:8619



Transcript annotation


Transcript_name:ENST00000358127.9 ENST00000377852.7 ENST00000523241.6 NM_001280548 NM_001280556 NM_001280547 NR_104000 NM_016734 NM_001280550 NM_001280554 NM_001280553 NM_001280552 NM_001280551 NM_001280549 NM_001280555 NR_103999
Distance:16
Num_trans:43
All_trans:ENST00000358127.9:16 ENST00000377852.7:16 ENST00000523241.6:16 NM_001280548:16 NM_001280556:16 NM_001280547:16 NR_104000:16 NM_016734:16 NM_001280550:16 NM_001280554:16 NM_001280553:16 NM_001280552:16 NM_001280551:16 NM_001280549:16 NM_001280555:16 NR_103999:16 ENST00000520154.6:99 M96944:178 ENST00000377853.6:243 ENST00000377840.6:243 AY463952:243 AY463953:243 AY463954:243 AY463955:243 AY463956:243 AY463957:243 ENST00000520281.5:253 ENST00000446742.5:253 ENST00000522003.5:253 ENST00000523145.5:253 ENST00000523493.5:253 ENST00000414447.5:253 ENST00000377847.6:253 FJ626419:253 FJ626420:253 FJ626421:253 FJ626422:253 FJ626423:253 FJ626424:253 FJ626425:253 BC156189:253 BC156927:253 AB529192:253



TATA-Box annotation


Distance to TSS:-24
Nearest PromoterID:NM_001280553
Entrez ID:5079
Nearest Unigene:Hs.654464
Nearest Refseq:NM_016734
Nearest Ensembl:ENSG00000196092
Gene Name:paired box 5
Gene Alias:ALL3|BSAP
Gene Description:paired box 5
Gene Type:protein-coding
CpG%:0.08
GC%:0.562189
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):