Difference between revisions of "TSS:Hg 101167.1"
From referenceTSS
| Line 3: | Line 3: | ||
|HNRPK= | |HNRPK= | ||
|TUNP= | |TUNP= | ||
| − | |all_trans=AY911506:-71 KJ896997:72 AB451263:72 CR456771:72 DQ890727:72 KJ891374:72 DQ893902:72 AB384978:72 AB451390:72 CU674174:72 ENST00000351839.7 | + | |all_trans=AY911506:-71 KJ896997:72 AB451263:72 CR456771:72 DQ890727:72 KJ891374:72 DQ893902:72 AB384978:72 AB451390:72 CU674174:72 ENST00000351839.7:-115 S74678:-115 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=-71 | |distance=-71 | ||
| − | |distance_to_tss= | + | |distance_to_tss=1885 |
|end=83978337 | |end=83978337 | ||
|end_of_center_position=83978331 | |end_of_center_position=83978331 | ||
|entrez_id=3190 | |entrez_id=3190 | ||
|gc_percent=0.368159 | |gc_percent=0.368159 | ||
| − | |gene_alias=AUKS | + | |gene_alias=AUKS{{!}}CSBP{{!}}HNRPK{{!}}TUNP |
|gene_description=heterogeneous nuclear ribonucleoprotein K | |gene_description=heterogeneous nuclear ribonucleoprotein K | ||
|gene_id=3190 | |gene_id=3190 | ||
| Line 22: | Line 22: | ||
|hgnc_mgi_id=HGNC:5044 | |hgnc_mgi_id=HGNC:5044 | ||
|nearest_ensembl=ENSG00000165119 | |nearest_ensembl=ENSG00000165119 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_031263 |
|nearest_refseq=NM_002140 | |nearest_refseq=NM_002140 | ||
|nearest_unigene=Hs.522257 | |nearest_unigene=Hs.522257 | ||
| − | |num_trans= | + | |num_trans=12 |
|species=human | |species=human | ||
|start=83978323 | |start=83978323 | ||
Revision as of 16:33, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 83978330 |
|---|---|
| End of the center position in the TSS region: | 83978331 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AY911506 |
|---|---|
| Distance: | -71 |
| Num_trans: | 12 |
| All_trans: | AY911506:-71 KJ896997:72 AB451263:72 CR456771:72 DQ890727:72 KJ891374:72 DQ893902:72 AB384978:72 AB451390:72 CU674174:72 ENST00000351839.7:-115 S74678:-115 |
TATA-Box annotation
| Distance to TSS: | 1885 |
|---|---|
| Nearest PromoterID: | NM_031263 |
| Entrez ID: | 3190 |
| Nearest Unigene: | Hs.522257 |
| Nearest Refseq: | NM_002140 |
| Nearest Ensembl: | ENSG00000165119 |
| Gene Name: | heterogeneous nuclear ribonucleoprotein K |
| Gene Alias: | AUKS|CSBP|HNRPK|TUNP |
| Gene Description: | heterogeneous nuclear ribonucleoprotein K |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.368159 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
