Difference between revisions of "TSS:Hg 10127.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000488215.5 | + | |all_trans=ENST00000488215.5:-302 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.572139 | |gc_percent=0.572139 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=RERE antisense RNA 1 |
|gene_id=473 | |gene_id=473 | ||
| − | |gene_name=arginine-glutamic acid dipeptide | + | |gene_name=arginine-glutamic acid dipeptide repeats |
|gene_source=HGNC:9965 | |gene_source=HGNC:9965 | ||
|gene_symbol=RERE | |gene_symbol=RERE | ||
| − | |gene_synonyms=ARG ARP DNB1 KIAA0458 | + | |gene_synonyms=ARG ARP ATN2 DNB1 KIAA0458 |
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=HGNC:9965 | |hgnc_mgi_id=HGNC:9965 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_125999 | |nearest_refseq=NR_125999 | ||
|nearest_unigene=Hs.568612 | |nearest_unigene=Hs.568612 | ||
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
|start=8424893 | |start=8424893 | ||
|start_of_center_position=8424901 | |start_of_center_position=8424901 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000488215.5 | + | |transcript_name=ENST00000488215.5 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_10127.1 | |tss_id=hg_10127.1 | ||
Revision as of 16:36, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 8424901 |
|---|---|
| End of the center position in the TSS region: | 8424902 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000488215.5 |
|---|---|
| Distance: | -302 |
| Num_trans: | 1 |
| All_trans: | ENST00000488215.5:-302 |
TATA-Box annotation
| Distance to TSS: | 257 |
|---|---|
| Nearest PromoterID: | NR_125999 |
| Entrez ID: | 102724552 |
| Nearest Unigene: | Hs.568612 |
| Nearest Refseq: | NR_125999 |
| Nearest Ensembl: | |
| Gene Name: | arginine-glutamic acid dipeptide repeats |
| Gene Alias: | - |
| Gene Description: | RERE antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.02 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
