Difference between revisions of "TSS:Hg 101339.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000425666.2:-7 ENST00000436671.2:23 NR_109795:39 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| − | |distance= | + | |distance=-7 |
|distance_to_tss=-54 | |distance_to_tss=-54 | ||
|end=90433559 | |end=90433559 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_109795 | |nearest_refseq=NR_109795 | ||
|nearest_unigene=Hs.598482 | |nearest_unigene=Hs.598482 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=90433527 | |start=90433527 | ||
|start_of_center_position=90433543 | |start_of_center_position=90433543 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000425666.2 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101339.1 | |tss_id=hg_101339.1 | ||
Revision as of 16:37, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 90433543 |
|---|---|
| End of the center position in the TSS region: | 90433544 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000425666.2 |
|---|---|
| Distance: | -7 |
| Num_trans: | 3 |
| All_trans: | ENST00000425666.2:-7 ENST00000436671.2:23 NR_109795:39 |
TATA-Box annotation
| Distance to TSS: | -54 |
|---|---|
| Nearest PromoterID: | NR_109795 |
| Entrez ID: | 101927873 |
| Nearest Unigene: | Hs.598482 |
| Nearest Refseq: | NR_109795 |
| Nearest Ensembl: | ENSG00000231107 |
| Gene Name: | long intergenic non-protein coding RNA 1508 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 1508 |
| Gene Type: | ncRNA |
| CpG%: | 0.04 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
