Difference between revisions of "TSS:Hg 101522.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=BC012927:-29 M19922:-33 ENST00000375326.9:-40 NM_000507:-40 L10320:53 AY544122:75 AK223395:-105 D26054:156 D26055:156 D26056:156 KJ891148:160 KR709624:160 KR709625:160 KR709626:160 KR709627:160 KR712246:160 KR712249:160 CU680450:160 AK316583:-163 AF073475:165 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
|distance=-29 | |distance=-29 | ||
| − | |distance_to_tss= | + | |distance_to_tss=43 |
|end=94639478 | |end=94639478 | ||
|end_of_center_position=94639475 | |end_of_center_position=94639475 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_000507 | |nearest_refseq=NM_000507 | ||
|nearest_unigene=Hs.494496 | |nearest_unigene=Hs.494496 | ||
| − | |num_trans= | + | |num_trans=20 |
|species=human | |species=human | ||
|start=94639471 | |start=94639471 | ||
|start_of_center_position=94639474 | |start_of_center_position=94639474 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=BC012927 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101522.1 | |tss_id=hg_101522.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 16:42, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 94639474 |
|---|---|
| End of the center position in the TSS region: | 94639475 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC012927 |
|---|---|
| Distance: | -29 |
| Num_trans: | 20 |
| All_trans: | BC012927:-29 M19922:-33 ENST00000375326.9:-40 NM_000507:-40 L10320:53 AY544122:75 AK223395:-105 D26054:156 D26055:156 D26056:156 KJ891148:160 KR709624:160 KR709625:160 KR709626:160 KR709627:160 KR712246:160 KR712249:160 CU680450:160 AK316583:-163 AF073475:165 |
TATA-Box annotation
| Distance to TSS: | 43 |
|---|---|
| Nearest PromoterID: | NM_000507 |
| Entrez ID: | 2203 |
| Nearest Unigene: | Hs.494496 |
| Nearest Refseq: | NM_000507 |
| Nearest Ensembl: | ENSG00000165140 |
| Gene Name: | fructose-bisphosphatase 1 |
| Gene Alias: | FBP |
| Gene Description: | fructose-bisphosphatase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.741294 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
