Difference between revisions of "TSS:Hg 101726.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000529965. | + | |all_trans=ENST00000655615.1:472 ENST00000529965.3:476 NR_038853:476 BC030123:476 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| − | |distance= | + | |distance=472 |
| − | |distance_to_tss= | + | |distance_to_tss=432 |
|end=99907096 | |end=99907096 | ||
|end_of_center_position=99907087 | |end_of_center_position=99907087 | ||
| Line 11: | Line 11: | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=syntaxin 17 | |gene_description=syntaxin 17 | ||
| − | |gene_id= | + | |gene_id= |
| − | |gene_name=STX17 | + | |gene_name=STX17 divergent transcript |
|gene_source=HGNC:51174 | |gene_source=HGNC:51174 | ||
| − | |gene_symbol=STX17- | + | |gene_symbol=STX17-DT |
|gene_synonyms= | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| Line 27: | Line 27: | ||
|start_of_center_position=99907086 | |start_of_center_position=99907086 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000655615.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_101726.1 | |tss_id=hg_101726.1 | ||
Revision as of 16:46, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 99907086 |
|---|---|
| End of the center position in the TSS region: | 99907087 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000655615.1 |
|---|---|
| Distance: | 472 |
| Num_trans: | 4 |
| All_trans: | ENST00000655615.1:472 ENST00000529965.3:476 NR_038853:476 BC030123:476 |
TATA-Box annotation
| Distance to TSS: | 432 |
|---|---|
| Nearest PromoterID: | NM_017919 |
| Entrez ID: | 55014 |
| Nearest Unigene: | Hs.704031 |
| Nearest Refseq: | NM_017919 |
| Nearest Ensembl: | ENSG00000136874 |
| Gene Name: | STX17 divergent transcript |
| Gene Alias: | - |
| Gene Description: | syntaxin 17 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
