Difference between revisions of "TSS:Hg 101767.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AK310471:160 ENST00000374806. | + | |all_trans=ENST00000636434.1:160 AK310471:160 BC030595:180 ENST00000374806.2:212 NM_147180:212 AF400667:212 AK057524:221 AK302547:221 BC066299:242 JF432717:251 KJ891875:251 AF085237:260 AF145026:260 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=160 | |distance=160 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-218 |
|end=101595193 | |end=101595193 | ||
|end_of_center_position=101595187 | |end_of_center_position=101595187 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.58209 | |gc_percent=0.58209 | ||
|gene_alias=PPP3RL | |gene_alias=PPP3RL | ||
| − | |gene_description= | + | |gene_description=protein phosphatase 3 regulatory subunit B, beta |
| − | |gene_name=PPP3R2 | + | |gene_id=5535 |
| + | |gene_name=protein phosphatase 3 regulatory subunit B, beta | ||
| + | |gene_source=HGNC:9318 | ||
| + | |gene_symbol=PPP3R2 | ||
| + | |gene_synonyms=PPP3RL | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:9318 | ||
|nearest_ensembl=ENSG00000188386 | |nearest_ensembl=ENSG00000188386 | ||
|nearest_promoter_id=NM_147180 | |nearest_promoter_id=NM_147180 | ||
| Line 22: | Line 27: | ||
|start_of_center_position=101595186 | |start_of_center_position=101595186 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=AK310471 | + | |transcript_name=ENST00000636434.1 AK310471 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101767.1 | |tss_id=hg_101767.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=A0A1B0GUC7 | ||
}} | }} | ||
Revision as of 16:47, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 101595186 |
|---|---|
| End of the center position in the TSS region: | 101595187 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000636434.1 AK310471 |
|---|---|
| Distance: | 160 |
| Num_trans: | 13 |
| All_trans: | ENST00000636434.1:160 AK310471:160 BC030595:180 ENST00000374806.2:212 NM_147180:212 AF400667:212 AK057524:221 AK302547:221 BC066299:242 JF432717:251 KJ891875:251 AF085237:260 AF145026:260 |
TATA-Box annotation
| Distance to TSS: | -218 |
|---|---|
| Nearest PromoterID: | NM_147180 |
| Entrez ID: | 5535 |
| Nearest Unigene: | Hs.151167 |
| Nearest Refseq: | NM_147180 |
| Nearest Ensembl: | ENSG00000188386 |
| Gene Name: | protein phosphatase 3 regulatory subunit B, beta |
| Gene Alias: | PPP3RL |
| Gene Description: | protein phosphatase 3 regulatory subunit B, beta |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
