Difference between revisions of "TSS:Hg 101813.1"
From referenceTSS
| Line 4: | Line 4: | ||
|HDLDT1= | |HDLDT1= | ||
|TGD= | |TGD= | ||
| − | |all_trans=ENST00000457720.1:-81 | + | |all_trans=ENST00000665997.1:-66 ENST00000457720.1:-81 ENST00000659359.1:-95 ENST00000670487.1:-118 ENST00000658693.1:464 ENST00000654661.1:497 ENST00000665890.1:499 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| − | |distance=- | + | |distance=-66 |
| − | |distance_to_tss=- | + | |distance_to_tss=-63539 |
|end=104991700 | |end=104991700 | ||
|end_of_center_position=104991694 | |end_of_center_position=104991694 | ||
|entrez_id=19 | |entrez_id=19 | ||
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
| − | |gene_alias=ABC-1 | + | |gene_alias=ABC-1{{!}}ABC1{{!}}CERP{{!}}HDLDT1{{!}}TGD |
|gene_description=ATP binding cassette subfamily A member 1 | |gene_description=ATP binding cassette subfamily A member 1 | ||
| − | |gene_name= | + | |gene_id= |
| + | |gene_name=cancer/testis associated transcript 70 | ||
| + | |gene_source=HGNC:37195 | ||
| + | |gene_symbol=CT70 | ||
| + | |gene_synonyms=LeXis | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:37195 | ||
|nearest_ensembl=ENSG00000165029 | |nearest_ensembl=ENSG00000165029 | ||
|nearest_promoter_id=NM_005502 | |nearest_promoter_id=NM_005502 | ||
|nearest_refseq=NM_005502 | |nearest_refseq=NM_005502 | ||
|nearest_unigene=Hs.659274 | |nearest_unigene=Hs.659274 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=human | |species=human | ||
|start=104991687 | |start=104991687 | ||
|start_of_center_position=104991693 | |start_of_center_position=104991693 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000665997.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101813.1 | |tss_id=hg_101813.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 16:48, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 104991693 |
|---|---|
| End of the center position in the TSS region: | 104991694 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000665997.1 |
|---|---|
| Distance: | -66 |
| Num_trans: | 7 |
| All_trans: | ENST00000665997.1:-66 ENST00000457720.1:-81 ENST00000659359.1:-95 ENST00000670487.1:-118 ENST00000658693.1:464 ENST00000654661.1:497 ENST00000665890.1:499 |
TATA-Box annotation
| Distance to TSS: | -63539 |
|---|---|
| Nearest PromoterID: | NM_005502 |
| Entrez ID: | 19 |
| Nearest Unigene: | Hs.659274 |
| Nearest Refseq: | NM_005502 |
| Nearest Ensembl: | ENSG00000165029 |
| Gene Name: | cancer/testis associated transcript 70 |
| Gene Alias: | ABC-1|ABC1|CERP|HDLDT1|TGD |
| Gene Description: | ATP binding cassette subfamily A member 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
