Difference between revisions of "TSS:Hg 101882.1"
From referenceTSS
| Line 3: | Line 3: | ||
|CG6= | |CG6= | ||
|EIEE37= | |EIEE37= | ||
| − | |all_trans= | + | |all_trans=BC156447:-1 AF155065:-1 ENST00000561981.5:32 NM_014334:32 ENST00000644747.1:278 ENST00000642299.1:348 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| Line 12: | Line 12: | ||
|entrez_id=23732 | |entrez_id=23732 | ||
|gc_percent=0.741294 | |gc_percent=0.741294 | ||
| − | |gene_alias=C9orf4 | + | |gene_alias=C9orf4{{!}}CG-6{{!}}CG6{{!}}EIEE37 |
|gene_description=ferric chelate reductase 1 like | |gene_description=ferric chelate reductase 1 like | ||
|gene_id=23732 | |gene_id=23732 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_014334 | |nearest_refseq=NM_014334 | ||
|nearest_unigene=Hs.347537 | |nearest_unigene=Hs.347537 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=109167280 | |start=109167280 | ||
|start_of_center_position=109167285 | |start_of_center_position=109167285 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=BC156447 AF155065 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101882.1 | |tss_id=hg_101882.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 16:50, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 109167285 |
|---|---|
| End of the center position in the TSS region: | 109167286 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC156447 AF155065 |
|---|---|
| Distance: | -1 |
| Num_trans: | 6 |
| All_trans: | BC156447:-1 AF155065:-1 ENST00000561981.5:32 NM_014334:32 ENST00000644747.1:278 ENST00000642299.1:348 |
TATA-Box annotation
| Distance to TSS: | 6 |
|---|---|
| Nearest PromoterID: | NM_014334 |
| Entrez ID: | 23732 |
| Nearest Unigene: | Hs.347537 |
| Nearest Refseq: | NM_014334 |
| Nearest Ensembl: | ENSG00000260230 |
| Gene Name: | ferric chelate reductase 1 like |
| Gene Alias: | C9orf4|CG-6|CG6|EIEE37 |
| Gene Description: | ferric chelate reductase 1 like |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.741294 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
