Difference between revisions of "TSS:Hg 101907.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|PTPH1= | |PTPH1= | ||
| − | |all_trans=ENST00000262539.7:0 ENST00000374541. | + | |all_trans=ENST00000262539.7:0 ENST00000374541.4:0 NM_001145368:0 NM_002829:0 AK316066:0 AK295875:0 AK304434:0 BC063287:0 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.19 | |cpg_percent=0.19 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=22 |
|end=109498318 | |end=109498318 | ||
|end_of_center_position=109498285 | |end_of_center_position=109498285 | ||
|entrez_id=5774 | |entrez_id=5774 | ||
|gc_percent=0.840796 | |gc_percent=0.840796 | ||
| − | |gene_alias=PTP-H1 | + | |gene_alias=PTP-H1{{!}}PTPH1 |
| − | |gene_description= | + | |gene_description=protein tyrosine phosphatase non-receptor type 3 |
|gene_id=5774 | |gene_id=5774 | ||
| − | |gene_name= | + | |gene_name=protein tyrosine phosphatase non-receptor type 3 |
|gene_source=HGNC:9655 | |gene_source=HGNC:9655 | ||
|gene_symbol=PTPN3 | |gene_symbol=PTPN3 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_002829 | |nearest_refseq=NM_002829 | ||
|nearest_unigene=Hs.436429 | |nearest_unigene=Hs.436429 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=human | |species=human | ||
|start=109498251 | |start=109498251 | ||
|start_of_center_position=109498284 | |start_of_center_position=109498284 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000262539.7 ENST00000374541. | + | |transcript_name=ENST00000262539.7 ENST00000374541.4 NM_001145368 NM_002829 AK316066 AK295875 AK304434 BC063287 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101907.1 | |tss_id=hg_101907.1 | ||
Revision as of 16:51, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 109498284 |
|---|---|
| End of the center position in the TSS region: | 109498285 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000262539.7 ENST00000374541.4 NM_001145368 NM_002829 AK316066 AK295875 AK304434 BC063287 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8 |
| All_trans: | ENST00000262539.7:0 ENST00000374541.4:0 NM_001145368:0 NM_002829:0 AK316066:0 AK295875:0 AK304434:0 BC063287:0 |
TATA-Box annotation
| Distance to TSS: | 22 |
|---|---|
| Nearest PromoterID: | NM_002829 |
| Entrez ID: | 5774 |
| Nearest Unigene: | Hs.436429 |
| Nearest Refseq: | NM_002829 |
| Nearest Ensembl: | ENSG00000070159 |
| Gene Name: | protein tyrosine phosphatase non-receptor type 3 |
| Gene Alias: | PTP-H1|PTPH1 |
| Gene Description: | protein tyrosine phosphatase non-receptor type 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.19 |
| GC%: | 0.840796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
