Difference between revisions of "TSS:Hg 102000.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AK308313:0 ENST00000602447.5:-100 | + | |all_trans=NM_001364930:0 NM_001364931:0 AK308313:0 ENST00000602447.5:-100 LF212975:290 MA448552:290 AK122712:-448 ENST00000602978.1:-478 LF354974:485 MA590551:485 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-4 |
|end=111483579 | |end=111483579 | ||
|end_of_center_position=111483566 | |end_of_center_position=111483566 | ||
|entrez_id=23392 | |entrez_id=23392 | ||
|gc_percent=0.78607 | |gc_percent=0.78607 | ||
| − | |gene_alias=ECM29 | + | |gene_alias=ECM29{{!}}KIAA0368 |
| − | |gene_description= | + | |gene_description=Ecm29 proteasome adaptor and scaffold |
|gene_id=23392 | |gene_id=23392 | ||
| − | |gene_name= | + | |gene_name=Ecm29 proteasome adaptor and scaffold |
|gene_source=HGNC:29020 | |gene_source=HGNC:29020 | ||
| − | |gene_symbol= | + | |gene_symbol=ECPAS |
|gene_synonyms=ECM29 FLJ22036 | |gene_synonyms=ECM29 FLJ22036 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:29020 | |hgnc_mgi_id=HGNC:29020 | ||
|nearest_ensembl=ENSG00000136813 | |nearest_ensembl=ENSG00000136813 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001364931 |
|nearest_refseq=NM_001080398 | |nearest_refseq=NM_001080398 | ||
|nearest_unigene=Hs.368255 | |nearest_unigene=Hs.368255 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=111483552 | |start=111483552 | ||
|start_of_center_position=111483565 | |start_of_center_position=111483565 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=AK308313 | + | |transcript_name=NM_001364930 NM_001364931 AK308313 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102000.1 | |tss_id=hg_102000.1 | ||
Revision as of 16:53, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 111483565 |
|---|---|
| End of the center position in the TSS region: | 111483566 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001364930 NM_001364931 AK308313 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10 |
| All_trans: | NM_001364930:0 NM_001364931:0 AK308313:0 ENST00000602447.5:-100 LF212975:290 MA448552:290 AK122712:-448 ENST00000602978.1:-478 LF354974:485 MA590551:485 |
TATA-Box annotation
| Distance to TSS: | -4 |
|---|---|
| Nearest PromoterID: | NM_001364931 |
| Entrez ID: | 23392 |
| Nearest Unigene: | Hs.368255 |
| Nearest Refseq: | NM_001080398 |
| Nearest Ensembl: | ENSG00000136813 |
| Gene Name: | Ecm29 proteasome adaptor and scaffold |
| Gene Alias: | ECM29|KIAA0368 |
| Gene Description: | Ecm29 proteasome adaptor and scaffold |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.78607 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
