Difference between revisions of "TSS:Hg 102016.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000338205.9:0 | + | |all_trans=ENST00000338205.9:0 NM_001364929:0 NM_001363756:0 LF354975:2 MA590552:2 ENST00000602978.1:299 AK122712:329 ENST00000259335.8:-349 LF383872:-349 MA619449:-349 BC172431:-350 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=7 |
|end=111484396 | |end=111484396 | ||
|end_of_center_position=111484376 | |end_of_center_position=111484376 | ||
|entrez_id=23392 | |entrez_id=23392 | ||
|gc_percent=0.681592 | |gc_percent=0.681592 | ||
| − | |gene_alias=ECM29 | + | |gene_alias=ECM29{{!}}KIAA0368 |
| − | |gene_description= | + | |gene_description=Ecm29 proteasome adaptor and scaffold |
|gene_id=23392 | |gene_id=23392 | ||
| − | |gene_name= | + | |gene_name=Ecm29 proteasome adaptor and scaffold |
|gene_source=HGNC:29020 | |gene_source=HGNC:29020 | ||
| − | |gene_symbol= | + | |gene_symbol=ECPAS |
|gene_synonyms=ECM29 FLJ22036 | |gene_synonyms=ECM29 FLJ22036 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:29020 | |hgnc_mgi_id=HGNC:29020 | ||
|nearest_ensembl=ENSG00000136813 | |nearest_ensembl=ENSG00000136813 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001363756 |
|nearest_refseq=NM_001080398 | |nearest_refseq=NM_001080398 | ||
|nearest_unigene=Hs.368255 | |nearest_unigene=Hs.368255 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=human | |species=human | ||
|start=111484355 | |start=111484355 | ||
|start_of_center_position=111484375 | |start_of_center_position=111484375 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000338205.9 | + | |transcript_name=ENST00000338205.9 NM_001364929 NM_001363756 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102016.1 | |tss_id=hg_102016.1 | ||
Revision as of 16:53, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 111484375 |
|---|---|
| End of the center position in the TSS region: | 111484376 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000338205.9 NM_001364929 NM_001363756 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | ENST00000338205.9:0 NM_001364929:0 NM_001363756:0 LF354975:2 MA590552:2 ENST00000602978.1:299 AK122712:329 ENST00000259335.8:-349 LF383872:-349 MA619449:-349 BC172431:-350 |
TATA-Box annotation
| Distance to TSS: | 7 |
|---|---|
| Nearest PromoterID: | NM_001363756 |
| Entrez ID: | 23392 |
| Nearest Unigene: | Hs.368255 |
| Nearest Refseq: | NM_001080398 |
| Nearest Ensembl: | ENSG00000136813 |
| Gene Name: | Ecm29 proteasome adaptor and scaffold |
| Gene Alias: | ECM29|KIAA0368 |
| Gene Description: | Ecm29 proteasome adaptor and scaffold |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.681592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
