Difference between revisions of "TSS:Hg 102127.1"
From referenceTSS
| Line 8: | Line 8: | ||
|ITILC= | |ITILC= | ||
|UTI= | |UTI= | ||
| − | |all_trans=AK290837:0 X04225:9 ENST00000603230 | + | |all_trans=ENST00000265132.8:0 NM_001633:0 AK290837:0 X04225:9 ENST00000603230.1:-20 AK310791:-20 AY544123:21 X04494:36 AB463406:78 HQ448440:80 KJ890666:80 CU692002:80 AK310776:-91 BC041593:-127 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=1 |
|end=114078308 | |end=114078308 | ||
|end_of_center_position=114078299 | |end_of_center_position=114078299 | ||
|entrez_id=259 | |entrez_id=259 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
| − | |gene_alias=A1M | + | |gene_alias=A1M{{!}}EDC1{{!}}HCP{{!}}HI30{{!}}IATIL{{!}}ITI{{!}}ITIL{{!}}ITILC{{!}}UTI |
|gene_description=alpha-1-microglobulin/bikunin precursor | |gene_description=alpha-1-microglobulin/bikunin precursor | ||
|gene_id=259 | |gene_id=259 | ||
| Line 30: | Line 30: | ||
|nearest_refseq=NM_001633 | |nearest_refseq=NM_001633 | ||
|nearest_unigene=Hs.436911 | |nearest_unigene=Hs.436911 | ||
| − | |num_trans= | + | |num_trans=14 |
|species=human | |species=human | ||
|start=114078289 | |start=114078289 | ||
|start_of_center_position=114078298 | |start_of_center_position=114078298 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=AK290837 | + | |transcript_name=ENST00000265132.8 NM_001633 AK290837 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102127.1 | |tss_id=hg_102127.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=P02760 |
}} | }} | ||
Revision as of 16:56, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 114078298 |
|---|---|
| End of the center position in the TSS region: | 114078299 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000265132.8 NM_001633 AK290837 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | ENST00000265132.8:0 NM_001633:0 AK290837:0 X04225:9 ENST00000603230.1:-20 AK310791:-20 AY544123:21 X04494:36 AB463406:78 HQ448440:80 KJ890666:80 CU692002:80 AK310776:-91 BC041593:-127 |
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NM_001633 |
| Entrez ID: | 259 |
| Nearest Unigene: | Hs.436911 |
| Nearest Refseq: | NM_001633 |
| Nearest Ensembl: | ENSG00000106927 |
| Gene Name: | alpha-1-microglobulin/bikunin precursor |
| Gene Alias: | A1M|EDC1|HCP|HI30|IATIL|ITI|ITIL|ITILC|UTI |
| Gene Description: | alpha-1-microglobulin/bikunin precursor |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
