Difference between revisions of "TSS:Hg 102160.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000312033.3 | + | |all_trans=ENST00000374088.8:42 NM_001317950:42 ENST00000312033.3:-49 AB075848:-49 AK131082:61 AK160382:61 AY703041:86 AY703042:86 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| − | |distance= | + | |distance=42 |
| − | |distance_to_tss=- | + | |distance_to_tss=-46 |
|end=114388032 | |end=114388032 | ||
|end_of_center_position=114388028 | |end_of_center_position=114388028 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_030767 | |nearest_refseq=NM_030767 | ||
|nearest_unigene=Hs.494895 | |nearest_unigene=Hs.494895 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=human | |species=human | ||
|start=114388023 | |start=114388023 | ||
|start_of_center_position=114388027 | |start_of_center_position=114388027 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000374088.8 NM_001317950 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102160.1 | |tss_id=hg_102160.1 | ||
Revision as of 16:57, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 114388027 |
|---|---|
| End of the center position in the TSS region: | 114388028 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000374088.8 NM_001317950 |
|---|---|
| Distance: | 42 |
| Num_trans: | 8 |
| All_trans: | ENST00000374088.8:42 NM_001317950:42 ENST00000312033.3:-49 AB075848:-49 AK131082:61 AK160382:61 AY703041:86 AY703042:86 |
TATA-Box annotation
| Distance to TSS: | -46 |
|---|---|
| Nearest PromoterID: | NM_001317950 |
| Entrez ID: | 80709 |
| Nearest Unigene: | Hs.494895 |
| Nearest Refseq: | NM_030767 |
| Nearest Ensembl: | ENSG00000106948 |
| Gene Name: | AT-hook transcription factor |
| Gene Alias: | - |
| Gene Description: | AT-hook transcription factor |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
