Difference between revisions of "TSS:Hg 102174.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000612244. | + | |all_trans=ENST00000612244.5:0 ENST00000436752.3:-116 NM_001371884:-116 NR_163988:-116 NR_133056:-116 NR_144867:-116 NR_163989:-116 NM_001199233:-116 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=20 | |distance_to_tss=20 | ||
|end=114682076 | |end=114682076 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.532338 | |gc_percent=0.532338 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=testis expressed 48 |
|gene_id=100505478 | |gene_id=100505478 | ||
| − | |gene_name= | + | |gene_name=testis expressed 48 |
| − | |gene_source= | + | |gene_source=HGNC:52393 |
| − | |gene_symbol= | + | |gene_symbol=TEX48 |
|gene_synonyms= | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id= | + | |hgnc_mgi_id=HGNC:52393 |
|nearest_ensembl=ENSG00000230601 | |nearest_ensembl=ENSG00000230601 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_133056 |
|nearest_refseq=NM_001199233 | |nearest_refseq=NM_001199233 | ||
|nearest_unigene=Hs.200101 | |nearest_unigene=Hs.200101 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=human | |species=human | ||
|start=114682061 | |start=114682061 | ||
|start_of_center_position=114682068 | |start_of_center_position=114682068 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000612244. | + | |transcript_name=ENST00000612244.5 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_102174.1 | |tss_id=hg_102174.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=A0A1B0GUM3 |
}} | }} | ||
Revision as of 16:57, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 114682068 |
|---|---|
| End of the center position in the TSS region: | 114682069 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000612244.5 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8 |
| All_trans: | ENST00000612244.5:0 ENST00000436752.3:-116 NM_001371884:-116 NR_163988:-116 NR_133056:-116 NR_144867:-116 NR_163989:-116 NM_001199233:-116 |
TATA-Box annotation
| Distance to TSS: | 20 |
|---|---|
| Nearest PromoterID: | NR_133056 |
| Entrez ID: | 100505478 |
| Nearest Unigene: | Hs.200101 |
| Nearest Refseq: | NM_001199233 |
| Nearest Ensembl: | ENSG00000230601 |
| Gene Name: | testis expressed 48 |
| Gene Alias: | - |
| Gene Description: | testis expressed 48 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.532338 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
