Difference between revisions of "TSS:Hg 102325.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|MGC:10353= | |MGC:10353= | ||
| − | |all_trans=BC024145:248 U19261:251 BT019408:326 HQ447750:326 KJ897703:326 AB590501:326 CU692854:326 NM_005658:- | + | |all_trans=BC024145:248 U19261:251 BT019408:326 HQ447750:326 KJ897703:326 AB590501:326 CU692854:326 ENST00000373887.8:-385 NM_005658:-385 AK090468:-484 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=248 | |distance=248 | ||
| − | |distance_to_tss= | + | |distance_to_tss=390 |
|end=120926411 | |end=120926411 | ||
|end_of_center_position=120926406 | |end_of_center_position=120926406 | ||
|entrez_id=7185 | |entrez_id=7185 | ||
|gc_percent=0.527363 | |gc_percent=0.527363 | ||
| − | |gene_alias=EBI6 | + | |gene_alias=EBI6{{!}}MGC:10353 |
|gene_description=TNF receptor associated factor 1 | |gene_description=TNF receptor associated factor 1 | ||
|gene_id=7185 | |gene_id=7185 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_005658 | |nearest_refseq=NM_005658 | ||
|nearest_unigene=Hs.531251 | |nearest_unigene=Hs.531251 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=120926400 | |start=120926400 | ||
Revision as of 17:01, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 120926405 |
|---|---|
| End of the center position in the TSS region: | 120926406 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC024145 |
|---|---|
| Distance: | 248 |
| Num_trans: | 10 |
| All_trans: | BC024145:248 U19261:251 BT019408:326 HQ447750:326 KJ897703:326 AB590501:326 CU692854:326 ENST00000373887.8:-385 NM_005658:-385 AK090468:-484 |
TATA-Box annotation
| Distance to TSS: | 390 |
|---|---|
| Nearest PromoterID: | NM_005658 |
| Entrez ID: | 7185 |
| Nearest Unigene: | Hs.531251 |
| Nearest Refseq: | NM_005658 |
| Nearest Ensembl: | ENSG00000056558 |
| Gene Name: | TNF receptor associated factor 1 |
| Gene Alias: | EBI6|MGC:10353 |
| Gene Description: | TNF receptor associated factor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.527363 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
