Difference between revisions of "TSS:Hg 102434.1"
From referenceTSS
| Line 8: | Line 8: | ||
|SPGF8= | |SPGF8= | ||
|SRXY3= | |SRXY3= | ||
| − | |all_trans=ENST00000455734.1:-19 | + | |all_trans=ENST00000455734.1:-19 ENST00000373588.9:-183 NM_004959:-183 ENST00000620110.4:-204 BC032501:-204 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
|distance=-19 | |distance=-19 | ||
| − | |distance_to_tss= | + | |distance_to_tss=186 |
|end=124507216 | |end=124507216 | ||
|end_of_center_position=124507213 | |end_of_center_position=124507213 | ||
|entrez_id=2516 | |entrez_id=2516 | ||
|gc_percent=0.681592 | |gc_percent=0.681592 | ||
| − | |gene_alias=AD4BP | + | |gene_alias=AD4BP{{!}}ELP{{!}}FTZ1{{!}}FTZF1{{!}}POF7{{!}}SF-1{{!}}SF1{{!}}SPGF8{{!}}SRXX4{{!}}SRXY3{{!}}hSF-1 |
|gene_description=nuclear receptor subfamily 5 group A member 1 | |gene_description=nuclear receptor subfamily 5 group A member 1 | ||
|gene_id=2516 | |gene_id=2516 | ||
| Line 23: | Line 23: | ||
|gene_source=HGNC:7983 | |gene_source=HGNC:7983 | ||
|gene_symbol=NR5A1 | |gene_symbol=NR5A1 | ||
| − | |gene_synonyms=AD4BP ELP FTZ1 SF-1 | + | |gene_synonyms=AD4BP ELP FTZ1 SF-1 SF1 hSF-1 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hSF-1= | |hSF-1= | ||
| Line 31: | Line 31: | ||
|nearest_refseq=NM_004959 | |nearest_refseq=NM_004959 | ||
|nearest_unigene=Hs.495108 | |nearest_unigene=Hs.495108 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=human | |species=human | ||
|start=124507209 | |start=124507209 | ||
|start_of_center_position=124507212 | |start_of_center_position=124507212 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-12(CCTCTAATGGCC,+,0.00) |
| − | |transcript_name=ENST00000455734 | + | |transcript_name=ENST00000455734.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102434.1 | |tss_id=hg_102434.1 | ||
Revision as of 17:03, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 124507212 |
|---|---|
| End of the center position in the TSS region: | 124507213 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000455734.1 |
|---|---|
| Distance: | -19 |
| Num_trans: | 5 |
| All_trans: | ENST00000455734.1:-19 ENST00000373588.9:-183 NM_004959:-183 ENST00000620110.4:-204 BC032501:-204 |
TATA-Box annotation
| Distance to TSS: | 186 |
|---|---|
| Nearest PromoterID: | NM_004959 |
| Entrez ID: | 2516 |
| Nearest Unigene: | Hs.495108 |
| Nearest Refseq: | NM_004959 |
| Nearest Ensembl: | ENSG00000136931 |
| Gene Name: | nuclear receptor subfamily 5 group A member 1 |
| Gene Alias: | AD4BP|ELP|FTZ1|FTZF1|POF7|SF-1|SF1|SPGF8|SRXX4|SRXY3|hSF-1 |
| Gene Description: | nuclear receptor subfamily 5 group A member 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.681592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -12(CCTCTAATGGCC,+,0.00) |
