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Difference between revisions of "TSS:Hg 102459.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=AK302445:0 BC032853:-52 U51587:-76 ENST00000373555.8:-79 uc004bpc.4:-79 NM_002077:-87
+
|all_trans=AK302445:0 BC032853:-52 ENST00000373555.9:-63 NM_002077:-63 U51587:-76
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.1
 
|cpg_percent=0.1
 
|distance=0
 
|distance=0
|distance_to_tss=120
+
|distance_to_tss=96
 
|end=124941020
 
|end=124941020
 
|end_of_center_position=124940987
 
|end_of_center_position=124940987
Line 22: Line 22:
 
|nearest_refseq=NM_002077
 
|nearest_refseq=NM_002077
 
|nearest_unigene=Hs.59504
 
|nearest_unigene=Hs.59504
|num_trans=6
+
|num_trans=5
 
|species=human
 
|species=human
 
|start=124940953
 
|start=124940953

Revision as of 17:04, 15 June 2021

Basic information about the TSS


TSS ID:hg_102459.1
Species:human
Chr:chr9
TSS Classification:yes
Start:124940953
End:124941020
Strand:-
TSS Score:1
Start of the center position in the TSS region:124940986
End of the center position in the TSS region:124940987



Gene and protein annotation


Transcript_name:AK302445
Distance:0
GeneID:2800
HGNC/MGI_ID:HGNC:4424
UniProt_ID:B4DYI0
Gene_name:golgin A1
Gene_symbol:GOLGA1
Gene_synonyms:MGC33154 golgin-97
Gene_source:HGNC:4424



Transcript annotation


Transcript_name:AK302445
Distance:0
Num_trans:5
All_trans:AK302445:0 BC032853:-52 ENST00000373555.9:-63 NM_002077:-63 U51587:-76



TATA-Box annotation


Distance to TSS:96
Nearest PromoterID:NM_002077
Entrez ID:2800
Nearest Unigene:Hs.59504
Nearest Refseq:NM_002077
Nearest Ensembl:ENSG00000136935
Gene Name:golgin A1
Gene Alias:golgin-97
Gene Description:golgin A1
Gene Type:protein-coding
CpG%:0.1
GC%:0.731343
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):