Difference between revisions of "TSS:Hg 102608.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000550992.1:0 | + | |all_trans=ENST00000644144.2:0 ENST00000550992.1:0 NM_000476:0 AK313758:0 BC036803:5 BC001116:5 BC100022:-8 EU794628:-61 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_000476 | |nearest_refseq=NM_000476 | ||
|nearest_unigene=Hs.175473 | |nearest_unigene=Hs.175473 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=human | |species=human | ||
|start=127877665 | |start=127877665 | ||
|start_of_center_position=127877673 | |start_of_center_position=127877673 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-33(CCTTATAAATAG,+,0.00) |
| − | |transcript_name=ENST00000550992.1 | + | |transcript_name=ENST00000644144.2 ENST00000550992.1 NM_000476 AK313758 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102608.1 | |tss_id=hg_102608.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=F8VRY5 | + | |uniprot_id=F8VRY5 Q6FGX9 |
}} | }} | ||
Revision as of 17:07, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 127877673 |
|---|---|
| End of the center position in the TSS region: | 127877674 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000644144.2 ENST00000550992.1 NM_000476 AK313758 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8 |
| All_trans: | ENST00000644144.2:0 ENST00000550992.1:0 NM_000476:0 AK313758:0 BC036803:5 BC001116:5 BC100022:-8 EU794628:-61 |
TATA-Box annotation
| Distance to TSS: | 69 |
|---|---|
| Nearest PromoterID: | NM_000476 |
| Entrez ID: | 203 |
| Nearest Unigene: | Hs.175473 |
| Nearest Refseq: | NM_000476 |
| Nearest Ensembl: | ENSG00000106992 |
| Gene Name: | adenylate kinase 1 |
| Gene Alias: | HTL-S-58j |
| Gene Description: | adenylate kinase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.751244 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -33(CCTTATAAATAG,+,0.00) |
