Difference between revisions of "TSS:Hg 103016.1"
From referenceTSS
| Line 2: | Line 2: | ||
|GLUT9= | |GLUT9= | ||
|HSA011372= | |HSA011372= | ||
| − | |all_trans= | + | |all_trans=ENST00000432868.1:0 AK074927:0 Y17803:11 AK074836:12 AK096630:12 ENST00000371899.9:17 NM_001145099:17 NM_017585:17 AK222919:17 ENST00000371897.8:20 ENST00000485978.1:20 AJ011372:20 AK225106:20 BC013740:28 ENST00000414172.1:41 AK294974:42 DQ891513:55 DQ894704:55 KJ898370:56 AB209108:248 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-30 |
|end=133479142 | |end=133479142 | ||
|end_of_center_position=133479129 | |end_of_center_position=133479129 | ||
|entrez_id=11182 | |entrez_id=11182 | ||
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
| − | |gene_alias=GLUT6 | + | |gene_alias=GLUT6{{!}}GLUT9{{!}}HSA011372 |
|gene_description=solute carrier family 2 member 6 | |gene_description=solute carrier family 2 member 6 | ||
|gene_id=11182 | |gene_id=11182 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:11011 | |hgnc_mgi_id=HGNC:11011 | ||
|nearest_ensembl=ENSG00000160326 | |nearest_ensembl=ENSG00000160326 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001145099 |
|nearest_refseq=NM_017585 | |nearest_refseq=NM_017585 | ||
|nearest_unigene=Hs.244378 | |nearest_unigene=Hs.244378 | ||
| − | |num_trans= | + | |num_trans=20 |
|species=human | |species=human | ||
|start=133479115 | |start=133479115 | ||
|start_of_center_position=133479128 | |start_of_center_position=133479128 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000432868.1 AK074927 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103016.1 | |tss_id=hg_103016.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=F2Z2F6 | + | |uniprot_id=F2Z2F6 |
}} | }} | ||
Revision as of 17:17, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 133479128 |
|---|---|
| End of the center position in the TSS region: | 133479129 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000432868.1 AK074927 |
|---|---|
| Distance: | 0 |
| Num_trans: | 20 |
| All_trans: | ENST00000432868.1:0 AK074927:0 Y17803:11 AK074836:12 AK096630:12 ENST00000371899.9:17 NM_001145099:17 NM_017585:17 AK222919:17 ENST00000371897.8:20 ENST00000485978.1:20 AJ011372:20 AK225106:20 BC013740:28 ENST00000414172.1:41 AK294974:42 DQ891513:55 DQ894704:55 KJ898370:56 AB209108:248 |
TATA-Box annotation
| Distance to TSS: | -30 |
|---|---|
| Nearest PromoterID: | NM_001145099 |
| Entrez ID: | 11182 |
| Nearest Unigene: | Hs.244378 |
| Nearest Refseq: | NM_017585 |
| Nearest Ensembl: | ENSG00000160326 |
| Gene Name: | solute carrier family 2 member 6 |
| Gene Alias: | GLUT6|GLUT9|HSA011372 |
| Gene Description: | solute carrier family 2 member 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
