Difference between revisions of "TSS:Hg 103027.1"
From referenceTSS
| Line 4: | Line 4: | ||
|SARD= | |SARD= | ||
|SDH= | |SDH= | ||
| − | |all_trans=ENST00000371868.5 | + | |all_trans=ENST00000371868.5:-101 AK093794:-101 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance=-101 | |distance=-101 | ||
| − | |distance_to_tss= | + | |distance_to_tss=34770 |
|end=133703600 | |end=133703600 | ||
|end_of_center_position=133703582 | |end_of_center_position=133703582 | ||
|entrez_id=1757 | |entrez_id=1757 | ||
|gc_percent=0.681592 | |gc_percent=0.681592 | ||
| − | |gene_alias=BPR-2 | + | |gene_alias=BPR-2{{!}}DMGDHL1{{!}}SAR{{!}}SARD{{!}}SDH |
|gene_description=sarcosine dehydrogenase | |gene_description=sarcosine dehydrogenase | ||
|gene_id=1757 | |gene_id=1757 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_007101 | |nearest_refseq=NM_007101 | ||
|nearest_unigene=Hs.198003 | |nearest_unigene=Hs.198003 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=133703563 | |start=133703563 | ||
|start_of_center_position=133703581 | |start_of_center_position=133703581 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000371868.5 | + | |transcript_name=ENST00000371868.5 AK093794 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103027.1 | |tss_id=hg_103027.1 | ||
Revision as of 17:17, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 133703581 |
|---|---|
| End of the center position in the TSS region: | 133703582 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000371868.5 AK093794 |
|---|---|
| Distance: | -101 |
| Num_trans: | 2 |
| All_trans: | ENST00000371868.5:-101 AK093794:-101 |
TATA-Box annotation
| Distance to TSS: | 34770 |
|---|---|
| Nearest PromoterID: | NM_001134707 |
| Entrez ID: | 1757 |
| Nearest Unigene: | Hs.198003 |
| Nearest Refseq: | NM_007101 |
| Nearest Ensembl: | ENSG00000123453 |
| Gene Name: | sarcosine dehydrogenase |
| Gene Alias: | BPR-2|DMGDHL1|SAR|SARD|SDH |
| Gene Description: | sarcosine dehydrogenase |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.681592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
