Difference between revisions of "TSS:Hg 10310.1"
From referenceTSS
| Line 2: | Line 2: | ||
|C1orf187= | |C1orf187= | ||
|UNQ3119= | |UNQ3119= | ||
| − | |all_trans=ENST00000235310.7 | + | |all_trans=ENST00000235310.7:129 AK094316:129 NM_001127325:158 ENST00000376667.7:170 ENST00000376655.1:186 ENST00000376672.5:302 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
|distance=129 | |distance=129 | ||
| − | |distance_to_tss= | + | |distance_to_tss=97 |
|end=11691835 | |end=11691835 | ||
|end_of_center_position=11691807 | |end_of_center_position=11691807 | ||
|entrez_id=374946 | |entrez_id=374946 | ||
|gc_percent=0.800995 | |gc_percent=0.800995 | ||
| − | |gene_alias=AGPA3119 | + | |gene_alias=AGPA3119{{!}}C1orf187{{!}}UNQ3119{{!}}neucrin |
|gene_description=dorsal inhibitory axon guidance protein | |gene_description=dorsal inhibitory axon guidance protein | ||
|gene_id=10459 | |gene_id=10459 | ||
| − | |gene_name= | + | |gene_name=mitotic arrest deficient 2 like 2 |
|gene_source=HGNC:6764 | |gene_source=HGNC:6764 | ||
|gene_symbol=MAD2L2 | |gene_symbol=MAD2L2 | ||
| − | |gene_synonyms=MAD2B POLZ2 REV7 | + | |gene_synonyms=FANCV MAD2B POLZ2 REV7 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:6764 | |hgnc_mgi_id=HGNC:6764 | ||
| Line 25: | Line 25: | ||
|nearest_unigene=Hs.632364 | |nearest_unigene=Hs.632364 | ||
|neucrin= | |neucrin= | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=11691778 | |start=11691778 | ||
|start_of_center_position=11691806 | |start_of_center_position=11691806 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000235310.7 | + | |transcript_name=ENST00000235310.7 AK094316 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10310.1 | |tss_id=hg_10310.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=A0A024R4I4 | + | |uniprot_id=A0A024R4I4 |
}} | }} | ||
Revision as of 17:19, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 11691806 |
|---|---|
| End of the center position in the TSS region: | 11691807 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000235310.7 AK094316 |
|---|---|
| Distance: | 129 |
| Num_trans: | 6 |
| All_trans: | ENST00000235310.7:129 AK094316:129 NM_001127325:158 ENST00000376667.7:170 ENST00000376655.1:186 ENST00000376672.5:302 |
TATA-Box annotation
| Distance to TSS: | 97 |
|---|---|
| Nearest PromoterID: | NM_198545 |
| Entrez ID: | 374946 |
| Nearest Unigene: | Hs.632364 |
| Nearest Refseq: | NM_198545 |
| Nearest Ensembl: | ENSG00000162490 |
| Gene Name: | mitotic arrest deficient 2 like 2 |
| Gene Alias: | AGPA3119|C1orf187|UNQ3119|neucrin |
| Gene Description: | dorsal inhibitory axon guidance protein |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.800995 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
