Difference between revisions of "TSS:Hg 103110.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000409386.3:256 | + | |all_trans=ENST00000389532.9:0 NM_015447:0 ENST00000409386.3:256 LF383682:325 MA619259:325 GQ891365:325 AF116701:346 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.165 | |cpg_percent=0.165 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=10 |
|end=135907589 | |end=135907589 | ||
|end_of_center_position=135907537 | |end_of_center_position=135907537 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_015447 | |nearest_refseq=NM_015447 | ||
|nearest_unigene=Hs.522493 | |nearest_unigene=Hs.522493 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=human | |species=human | ||
|start=135907483 | |start=135907483 | ||
|start_of_center_position=135907536 | |start_of_center_position=135907536 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000389532.9 NM_015447 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103110.1 | |tss_id=hg_103110.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q5T5Y3 | + | |uniprot_id=A0A384NY94 Q5T5Y3 |
}} | }} | ||
Revision as of 17:19, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 135907536 |
|---|---|
| End of the center position in the TSS region: | 135907537 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000389532.9 NM_015447 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | ENST00000389532.9:0 NM_015447:0 ENST00000409386.3:256 LF383682:325 MA619259:325 GQ891365:325 AF116701:346 |
TATA-Box annotation
| Distance to TSS: | 10 |
|---|---|
| Nearest PromoterID: | NM_015447 |
| Entrez ID: | 157922 |
| Nearest Unigene: | Hs.522493 |
| Nearest Refseq: | NM_015447 |
| Nearest Ensembl: | ENSG00000130559 |
| Gene Name: | calmodulin regulated spectrin associated protein 1 |
| Gene Alias: | - |
| Gene Description: | calmodulin regulated spectrin associated protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.825871 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
