Difference between revisions of "TSS:Hg 103116.1"
From referenceTSS
| Line 2: | Line 2: | ||
|KPC2= | |KPC2= | ||
|UBADC1= | |UBADC1= | ||
| − | |all_trans=ENST00000371756. | + | |all_trans=ENST00000371756.4:0 NM_016172:0 AF176796:0 BC004967:0 HM005604:0 LP895632:0 ENST00000478485.1:99 BC011822:105 DQ892567:149 KJ893030:149 DQ895782:149 CU678830:149 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.19 | |cpg_percent=0.19 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=18 |
|end=135961400 | |end=135961400 | ||
|end_of_center_position=135961356 | |end_of_center_position=135961356 | ||
|entrez_id=10422 | |entrez_id=10422 | ||
|gc_percent=0.80597 | |gc_percent=0.80597 | ||
| − | |gene_alias=GBDR1 | + | |gene_alias=GBDR1{{!}}KPC2{{!}}UBADC1 |
|gene_description=UBA domain containing 1 | |gene_description=UBA domain containing 1 | ||
|gene_id=10422 | |gene_id=10422 | ||
| Line 17: | Line 17: | ||
|gene_source=HGNC:30221 | |gene_source=HGNC:30221 | ||
|gene_symbol=UBAC1 | |gene_symbol=UBAC1 | ||
| − | |gene_synonyms=GBDR1 | + | |gene_synonyms=GBDR1 KPC2 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:30221 | |hgnc_mgi_id=HGNC:30221 | ||
| Line 29: | Line 29: | ||
|start_of_center_position=135961355 | |start_of_center_position=135961355 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000371756. | + | |transcript_name=ENST00000371756.4 NM_016172 AF176796 BC004967 HM005604 LP895632 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103116.1 | |tss_id=hg_103116.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q9BSL1 | + | |uniprot_id=A0A140VK64 Q9BSL1 |
}} | }} | ||
Revision as of 17:19, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 135961355 |
|---|---|
| End of the center position in the TSS region: | 135961356 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000371756.4 NM_016172 AF176796 BC004967 HM005604 LP895632 |
|---|---|
| Distance: | 0 |
| Num_trans: | 12 |
| All_trans: | ENST00000371756.4:0 NM_016172:0 AF176796:0 BC004967:0 HM005604:0 LP895632:0 ENST00000478485.1:99 BC011822:105 DQ892567:149 KJ893030:149 DQ895782:149 CU678830:149 |
TATA-Box annotation
| Distance to TSS: | 18 |
|---|---|
| Nearest PromoterID: | NM_016172 |
| Entrez ID: | 10422 |
| Nearest Unigene: | Hs.9194 |
| Nearest Refseq: | NM_016172 |
| Nearest Ensembl: | ENSG00000130560 |
| Gene Name: | UBA domain containing 1 |
| Gene Alias: | GBDR1|KPC2|UBADC1 |
| Gene Description: | UBA domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.19 |
| GC%: | 0.80597 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
