Difference between revisions of "TSS:Hg 103192.1"
From referenceTSS
| Line 4: | Line 4: | ||
|LPAAB= | |LPAAB= | ||
|LPAAT-beta= | |LPAAT-beta= | ||
| − | |all_trans=ENST00000371694.7:0 | + | |all_trans=ENST00000371694.7:0 BC000026:0 AF011374:0 HM005456:0 ENST00000538402.1:1 U56418:1 AF000237:-2 BC019292:3 BC004529:4 ENST00000470861.1:32 ENST00000371696.7:-36 NM_001012727:-36 NM_006412:-36 LF383683:-38 MA619260:-38 DQ892146:38 DQ895342:38 KJ906048:39 KJ898240:39 KJ902127:39 KR710265:39 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=48 |
|end=136687421 | |end=136687421 | ||
|end_of_center_position=136687409 | |end_of_center_position=136687409 | ||
|entrez_id=10555 | |entrez_id=10555 | ||
|gc_percent=0.79602 | |gc_percent=0.79602 | ||
| − | |gene_alias=1-AGPAT2 | + | |gene_alias=1-AGPAT2{{!}}BSCL{{!}}BSCL1{{!}}LPAAB{{!}}LPAAT-beta |
|gene_description=1-acylglycerol-3-phosphate O-acyltransferase 2 | |gene_description=1-acylglycerol-3-phosphate O-acyltransferase 2 | ||
|gene_id=10555 | |gene_id=10555 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_006412 | |nearest_refseq=NM_006412 | ||
|nearest_unigene=Hs.320151 | |nearest_unigene=Hs.320151 | ||
| − | |num_trans= | + | |num_trans=21 |
|species=human | |species=human | ||
|start=136687396 | |start=136687396 | ||
|start_of_center_position=136687408 | |start_of_center_position=136687408 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000371694.7 | + | |transcript_name=ENST00000371694.7 BC000026 AF011374 HM005456 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103192.1 | |tss_id=hg_103192.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=A0A024R8F9 | + | |uniprot_id=A0A024R8F9 |
}} | }} | ||
Revision as of 17:21, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 136687408 |
|---|---|
| End of the center position in the TSS region: | 136687409 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000371694.7 BC000026 AF011374 HM005456 |
|---|---|
| Distance: | 0 |
| Num_trans: | 21 |
| All_trans: | ENST00000371694.7:0 BC000026:0 AF011374:0 HM005456:0 ENST00000538402.1:1 U56418:1 AF000237:-2 BC019292:3 BC004529:4 ENST00000470861.1:32 ENST00000371696.7:-36 NM_001012727:-36 NM_006412:-36 LF383683:-38 MA619260:-38 DQ892146:38 DQ895342:38 KJ906048:39 KJ898240:39 KJ902127:39 KR710265:39 |
TATA-Box annotation
| Distance to TSS: | 48 |
|---|---|
| Nearest PromoterID: | NM_001012727 |
| Entrez ID: | 10555 |
| Nearest Unigene: | Hs.320151 |
| Nearest Refseq: | NM_006412 |
| Nearest Ensembl: | ENSG00000169692 |
| Gene Name: | 1-acylglycerol-3-phosphate O-acyltransferase 2 |
| Gene Alias: | 1-AGPAT2|BSCL|BSCL1|LPAAB|LPAAT-beta |
| Gene Description: | 1-acylglycerol-3-phosphate O-acyltransferase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.79602 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
