Difference between revisions of "TSS:Hg 10320.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=AJ237672:-107 LF357342:108 MA592919:108 ENST00000641407.1:-245 AB209113:-245 ENST00000641721.1:-310 LF213889:-367 MA449466:-367 ENST00000376583.7:-376 ENST00000423400.7:-388 ENST00000641759.1:-388 ENST00000641909.1:-388 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| Line 12: | Line 12: | ||
|gene_description=methylenetetrahydrofolate reductase | |gene_description=methylenetetrahydrofolate reductase | ||
|gene_id=4524 | |gene_id=4524 | ||
| − | |gene_name=methylenetetrahydrofolate reductase | + | |gene_name=methylenetetrahydrofolate reductase |
|gene_source=HGNC:7436 | |gene_source=HGNC:7436 | ||
|gene_symbol=MTHFR | |gene_symbol=MTHFR | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_005957 | |nearest_refseq=NM_005957 | ||
|nearest_unigene=Hs.214142 | |nearest_unigene=Hs.214142 | ||
| − | |num_trans= | + | |num_trans=12 |
|species=human | |species=human | ||
|start=11803114 | |start=11803114 | ||
|start_of_center_position=11803126 | |start_of_center_position=11803126 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=AJ237672 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_10320.1 | |tss_id=hg_10320.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 17:21, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 11803126 |
|---|---|
| End of the center position in the TSS region: | 11803127 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AJ237672 |
|---|---|
| Distance: | -107 |
| Num_trans: | 12 |
| All_trans: | AJ237672:-107 LF357342:108 MA592919:108 ENST00000641407.1:-245 AB209113:-245 ENST00000641721.1:-310 LF213889:-367 MA449466:-367 ENST00000376583.7:-376 ENST00000423400.7:-388 ENST00000641759.1:-388 ENST00000641909.1:-388 |
TATA-Box annotation
| Distance to TSS: | 551 |
|---|---|
| Nearest PromoterID: | NM_001330358 |
| Entrez ID: | 4524 |
| Nearest Unigene: | Hs.214142 |
| Nearest Refseq: | NM_005957 |
| Nearest Ensembl: | ENSG00000177000 |
| Gene Name: | methylenetetrahydrofolate reductase |
| Gene Alias: | - |
| Gene Description: | methylenetetrahydrofolate reductase |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
