Difference between revisions of "TSS:Hg 103208.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|LCN5= | |LCN5= | ||
| − | |all_trans=HQ258567:137 KJ895524:137 | + | |all_trans=HQ258567:137 KJ895524:137 GQ891310:139 BC130465:-162 BC132714:-162 ENST00000371688.8:-171 NM_178469:-207 AK126902:-207 BC042109:-216 ENST00000612714.1:-471 NM_001345934:-471 AY301268:-471 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| Line 10: | Line 10: | ||
|entrez_id=138307 | |entrez_id=138307 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
| − | |gene_alias=EP17 | + | |gene_alias=EP17{{!}}LCN5 |
|gene_description=lipocalin 8 | |gene_description=lipocalin 8 | ||
|gene_id=138307 | |gene_id=138307 | ||
Revision as of 17:21, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 136758070 |
|---|---|
| End of the center position in the TSS region: | 136758071 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | HQ258567 KJ895524 |
|---|---|
| Distance: | 137 |
| Num_trans: | 12 |
| All_trans: | HQ258567:137 KJ895524:137 GQ891310:139 BC130465:-162 BC132714:-162 ENST00000371688.8:-171 NM_178469:-207 AK126902:-207 BC042109:-216 ENST00000612714.1:-471 NM_001345934:-471 AY301268:-471 |
TATA-Box annotation
| Distance to TSS: | 209 |
|---|---|
| Nearest PromoterID: | NM_178469 |
| Entrez ID: | 138307 |
| Nearest Unigene: | Hs.323991 |
| Nearest Refseq: | NM_178469 |
| Nearest Ensembl: | ENSG00000204001 |
| Gene Name: | lipocalin 8 |
| Gene Alias: | EP17|LCN5 |
| Gene Description: | lipocalin 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
