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Difference between revisions of "TSS:Hg 103266.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENST00000431584.2:-355 uc064xhq.1:-355
+
|all_trans=ENST00000431584.2:-355
 
|chr=chr9
 
|chr=chr9
 
|cpg_percent=0.035
 
|cpg_percent=0.035
Line 22: Line 22:
 
|nearest_refseq=NM_207511
 
|nearest_refseq=NM_207511
 
|nearest_unigene=Hs.522509
 
|nearest_unigene=Hs.522509
|num_trans=2
+
|num_trans=1
 
|species=human
 
|species=human
 
|start=137012575
 
|start=137012575
 
|start_of_center_position=137012584
 
|start_of_center_position=137012584
 
|strand=-
 
|strand=-
|transcript_name=ENST00000431584.2 uc064xhq.1
+
|transcript_name=ENST00000431584.2
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_103266.1
 
|tss_id=hg_103266.1

Revision as of 17:23, 15 June 2021

Basic information about the TSS


TSS ID:hg_103266.1
Species:human
Chr:chr9
TSS Classification:yes
Start:137012575
End:137012594
Strand:-
TSS Score:1
Start of the center position in the TSS region:137012584
End of the center position in the TSS region:137012585



Gene and protein annotation


Transcript_name:ENST00000431584.2
Distance:-355
GeneID:20
HGNC/MGI_ID:HGNC:32
UniProt_ID:
Gene_name:ATP binding cassette subfamily A member 2
Gene_symbol:ABCA2
Gene_synonyms:
Gene_source:HGNC:32



Transcript annotation


Transcript_name:ENST00000431584.2
Distance:-355
Num_trans:1
All_trans:ENST00000431584.2:-355



TATA-Box annotation


Distance to TSS:-14879
Nearest PromoterID:NM_207511
Entrez ID:401563
Nearest Unigene:Hs.522509
Nearest Refseq:NM_207511
Nearest Ensembl:
Gene Name:ATP binding cassette subfamily A member 2
Gene Alias:-
Gene Description:chromosome 9 open reading frame 139
Gene Type:protein-coding
CpG%:0.035
GC%:0.661692
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):