Difference between revisions of "TSS:Hg 103298.1"
From referenceTSS
| Line 4: | Line 4: | ||
|CAB1= | |CAB1= | ||
|NPDC-1= | |NPDC-1= | ||
| − | |all_trans=ENST00000371601. | + | |all_trans=ENST00000371601.5:0 ENST00000485589.1:0 NM_015392:0 AK074793:0 AF285836:0 AF327349:1 BC004217:49 AF272357:86 ENST00000488145.1:101 AK225091:130 KJ894338:168 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-18 |
|end=137046234 | |end=137046234 | ||
|end_of_center_position=137046196 | |end_of_center_position=137046196 | ||
|entrez_id=56654 | |entrez_id=56654 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
| − | |gene_alias=CAB | + | |gene_alias=CAB{{!}}CAB-{{!}}CAB-1{{!}}CAB1{{!}}NPDC-1 |
| − | |gene_description= | + | |gene_description=neural proliferation, differentiation and control 1 |
|gene_id=56654 | |gene_id=56654 | ||
| − | |gene_name= | + | |gene_name=neural proliferation, differentiation and control 1 |
|gene_source=HGNC:7899 | |gene_source=HGNC:7899 | ||
|gene_symbol=NPDC1 | |gene_symbol=NPDC1 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_015392 | |nearest_refseq=NM_015392 | ||
|nearest_unigene=Hs.719906 | |nearest_unigene=Hs.719906 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=human | |species=human | ||
|start=137046156 | |start=137046156 | ||
|start_of_center_position=137046195 | |start_of_center_position=137046195 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000371601. | + | |transcript_name=ENST00000371601.5 ENST00000485589.1 NM_015392 AK074793 AF285836 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103298.1 | |tss_id=hg_103298.1 | ||
Revision as of 17:23, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 137046195 |
|---|---|
| End of the center position in the TSS region: | 137046196 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000371601.5 ENST00000485589.1 NM_015392 AK074793 AF285836 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | ENST00000371601.5:0 ENST00000485589.1:0 NM_015392:0 AK074793:0 AF285836:0 AF327349:1 BC004217:49 AF272357:86 ENST00000488145.1:101 AK225091:130 KJ894338:168 |
TATA-Box annotation
| Distance to TSS: | -18 |
|---|---|
| Nearest PromoterID: | NM_015392 |
| Entrez ID: | 56654 |
| Nearest Unigene: | Hs.719906 |
| Nearest Refseq: | NM_015392 |
| Nearest Ensembl: | ENSG00000107281 |
| Gene Name: | neural proliferation, differentiation and control 1 |
| Gene Alias: | CAB|CAB-|CAB-1|CAB1|NPDC-1 |
| Gene Description: | neural proliferation, differentiation and control 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
