Difference between revisions of "TSS:Hg 103307.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000596585.3:0 NR_027447 | + | |all_trans=ENST00000596585.3:0 NR_027447:0 AK023312:0 BC020858:121 BC032375:141 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| Line 9: | Line 9: | ||
|entrez_id=100289341 | |entrez_id=100289341 | ||
|gc_percent=0.681592 | |gc_percent=0.681592 | ||
| − | |gene_alias=- | + | |gene_alias=MAN1B1-AS1 |
| − | |gene_description=MAN1B1 | + | |gene_description=MAN1B1 divergent transcript |
|gene_id=100289341 | |gene_id=100289341 | ||
| − | |gene_name=MAN1B1 | + | |gene_name=MAN1B1 divergent transcript |
|gene_source=HGNC:48715 | |gene_source=HGNC:48715 | ||
| − | |gene_symbol=MAN1B1- | + | |gene_symbol=MAN1B1-DT |
|gene_synonyms= | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_027447 | |nearest_refseq=NR_027447 | ||
|nearest_unigene=Hs.593896 | |nearest_unigene=Hs.593896 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=human | |species=human | ||
|start=137086791 | |start=137086791 | ||
|start_of_center_position=137086815 | |start_of_center_position=137086815 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000596585.3 NR_027447 | + | |transcript_name=ENST00000596585.3 NR_027447 AK023312 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103307.1 | |tss_id=hg_103307.1 | ||
Revision as of 17:23, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 137086815 |
|---|---|
| End of the center position in the TSS region: | 137086816 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000596585.3 NR_027447 AK023312 |
|---|---|
| Distance: | 0 |
| Num_trans: | 5 |
| All_trans: | ENST00000596585.3:0 NR_027447:0 AK023312:0 BC020858:121 BC032375:141 |
TATA-Box annotation
| Distance to TSS: | 2 |
|---|---|
| Nearest PromoterID: | NR_027447 |
| Entrez ID: | 100289341 |
| Nearest Unigene: | Hs.593896 |
| Nearest Refseq: | NR_027447 |
| Nearest Ensembl: | ENSG00000268996 |
| Gene Name: | MAN1B1 divergent transcript |
| Gene Alias: | MAN1B1-AS1 |
| Gene Description: | MAN1B1 divergent transcript |
| Gene Type: | ncRNA |
| CpG%: | 0.11 |
| GC%: | 0.681592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
