Difference between revisions of "TSS:Hg 103363.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000479452.5:0 ENST00000460390.6:0 ENST00000475006.1:0 ENST00000465160.2:0 | + | |all_trans=ENST00000340951.9:0 ENST00000479452.5:0 ENST00000460390.6:0 ENST00000475006.1:0 ENST00000465160.2:0 NM_017820:0 NR_104598:0 NM_001286823:0 NR_104599:0 AK094438:0 BC037355:0 BC033079:0 BC069205:0 BC039252:0 AK000440:0 BC065002:22 HM005438:-51 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-20 |
|end=137423211 | |end=137423211 | ||
|end_of_center_position=137423183 | |end_of_center_position=137423183 | ||
| Line 15: | Line 15: | ||
|gene_source=HGNC:26023 | |gene_source=HGNC:26023 | ||
|gene_symbol=EXD3 | |gene_symbol=EXD3 | ||
| − | |gene_synonyms=FLJ20433 LOC54932 mut-7 | + | |gene_synonyms=FLJ20433 LOC54932 Nbr mut-7 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:26023 | |hgnc_mgi_id=HGNC:26023 | ||
|nearest_ensembl=ENSG00000187609 | |nearest_ensembl=ENSG00000187609 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_017820 |
|nearest_refseq=NM_017820 | |nearest_refseq=NM_017820 | ||
|nearest_unigene=Hs.495553 | |nearest_unigene=Hs.495553 | ||
| − | |num_trans= | + | |num_trans=17 |
|species=human | |species=human | ||
|start=137423153 | |start=137423153 | ||
|start_of_center_position=137423182 | |start_of_center_position=137423182 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000479452.5 ENST00000460390.6 ENST00000475006.1 ENST00000465160.2 | + | |transcript_name=ENST00000340951.9 ENST00000479452.5 ENST00000460390.6 ENST00000475006.1 ENST00000465160.2 NM_017820 NR_104598 NM_001286823 NR_104599 AK094438 BC037355 BC033079 BC069205 BC039252 AK000440 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103363.1 | |tss_id=hg_103363.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=E9PI94 | + | |uniprot_id=E9PI94 Q8N9H8 |
}} | }} | ||
Revision as of 17:25, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 137423182 |
|---|---|
| End of the center position in the TSS region: | 137423183 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000340951.9 ENST00000479452.5 ENST00000460390.6 ENST00000475006.1 ENST00000465160.2 NM_017820 NR_104598 NM_001286823 NR_104599 AK094438 BC037355 BC033079 BC069205 BC039252 AK000440 |
|---|---|
| Distance: | 0 |
| Num_trans: | 17 |
| All_trans: | ENST00000340951.9:0 ENST00000479452.5:0 ENST00000460390.6:0 ENST00000475006.1:0 ENST00000465160.2:0 NM_017820:0 NR_104598:0 NM_001286823:0 NR_104599:0 AK094438:0 BC037355:0 BC033079:0 BC069205:0 BC039252:0 AK000440:0 BC065002:22 HM005438:-51 |
TATA-Box annotation
| Distance to TSS: | -20 |
|---|---|
| Nearest PromoterID: | NM_017820 |
| Entrez ID: | 54932 |
| Nearest Unigene: | Hs.495553 |
| Nearest Refseq: | NM_017820 |
| Nearest Ensembl: | ENSG00000187609 |
| Gene Name: | exonuclease 3'-5' domain containing 3 |
| Gene Alias: | mut-7 |
| Gene Description: | exonuclease 3'-5' domain containing 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.800995 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
