Difference between revisions of "TSS:Hg 103728.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=ENST00000649625.1:0 ENST00000650412.1:0 ENST00000648398.1:0 NR_038291:0 AK094154:0 ENST00000648637.1:-4 ENST00000649110.1:5 ENST00000650205.1:7 ENST00000436383.2:-14 ENST00000648093.1:-35 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_038291 | |nearest_refseq=NR_038291 | ||
|nearest_unigene=Hs.498571 | |nearest_unigene=Hs.498571 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=6779583 | |start=6779583 | ||
|start_of_center_position=6779592 | |start_of_center_position=6779592 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000649625.1 ENST00000650412.1 ENST00000648398.1 NR_038291 AK094154 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_103728.1 | |tss_id=hg_103728.1 | ||
Revision as of 17:33, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 6779592 |
|---|---|
| End of the center position in the TSS region: | 6779593 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000649625.1 ENST00000650412.1 ENST00000648398.1 NR_038291 AK094154 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10 |
| All_trans: | ENST00000649625.1:0 ENST00000650412.1:0 ENST00000648398.1:0 NR_038291:0 AK094154:0 ENST00000648637.1:-4 ENST00000649110.1:5 ENST00000650205.1:7 ENST00000436383.2:-14 ENST00000648093.1:-35 |
TATA-Box annotation
| Distance to TSS: | -6 |
|---|---|
| Nearest PromoterID: | NR_038291 |
| Entrez ID: | 100507127 |
| Nearest Unigene: | Hs.498571 |
| Nearest Refseq: | NR_038291 |
| Nearest Ensembl: | ENSG00000238266 |
| Gene Name: | long intergenic non-protein coding RNA 707 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 707 |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
