Difference between revisions of "TSS:Hg 10398.1"
From referenceTSS
| Line 4: | Line 4: | ||
|SDR1= | |SDR1= | ||
|SDR16C1= | |SDR16C1= | ||
| + | |all_trans=ENST00000616661.5:43 NM_004753:43 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| − | |distance= | + | |distance=43 |
| − | |distance_to_tss=- | + | |distance_to_tss=-53 |
|end=12618274 | |end=12618274 | ||
|end_of_center_position=12618264 | |end_of_center_position=12618264 | ||
|entrez_id=9249 | |entrez_id=9249 | ||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
| − | |gene_alias=DD83.1 | + | |gene_alias=DD83.1{{!}}RDH17{{!}}Rsdr1{{!}}SDR1{{!}}SDR16C1{{!}}retSDR1 |
|gene_description=dehydrogenase/reductase 3 | |gene_description=dehydrogenase/reductase 3 | ||
| − | |gene_name=DHRS3 | + | |gene_id=9249 |
| + | |gene_name=dehydrogenase/reductase 3 | ||
| + | |gene_source=HGNC:17693 | ||
| + | |gene_symbol=DHRS3 | ||
| + | |gene_synonyms=RDH17 Rsdr1 SDR1 SDR16C1 retSDR1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:17693 | ||
|nearest_ensembl=ENSG00000162496 | |nearest_ensembl=ENSG00000162496 | ||
|nearest_promoter_id=NM_004753 | |nearest_promoter_id=NM_004753 | ||
|nearest_refseq=NM_004753 | |nearest_refseq=NM_004753 | ||
|nearest_unigene=Hs.289347 | |nearest_unigene=Hs.289347 | ||
| − | |num_trans= | + | |num_trans=2 |
|retSDR1= | |retSDR1= | ||
|species=human | |species=human | ||
| Line 26: | Line 32: | ||
|start_of_center_position=12618263 | |start_of_center_position=12618263 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000616661.5 NM_004753 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_10398.1 | |tss_id=hg_10398.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=O75911 | ||
}} | }} | ||
Revision as of 17:39, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 12618263 |
|---|---|
| End of the center position in the TSS region: | 12618264 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000616661.5 NM_004753 |
|---|---|
| Distance: | 43 |
| Num_trans: | 2 |
| All_trans: | ENST00000616661.5:43 NM_004753:43 |
TATA-Box annotation
| Distance to TSS: | -53 |
|---|---|
| Nearest PromoterID: | NM_004753 |
| Entrez ID: | 9249 |
| Nearest Unigene: | Hs.289347 |
| Nearest Refseq: | NM_004753 |
| Nearest Ensembl: | ENSG00000162496 |
| Gene Name: | dehydrogenase/reductase 3 |
| Gene Alias: | DD83.1|RDH17|Rsdr1|SDR1|SDR16C1|retSDR1 |
| Gene Description: | dehydrogenase/reductase 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
