Difference between revisions of "TSS:Hg 104.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000378821.3:33 NM_001146685:33 | + | |all_trans=ENST00000378821.3:33 NM_001146685:33 LF383938:33 MA619515:33 LF357554:284 MA593131:284 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001146685 | |nearest_refseq=NM_001146685 | ||
|nearest_unigene=Hs.729765 | |nearest_unigene=Hs.729765 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=1426068 | |start=1426068 | ||
|start_of_center_position=1426081 | |start_of_center_position=1426081 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000378821.3 NM_001146685 | + | |transcript_name=ENST00000378821.3 NM_001146685 LF383938 MA619515 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104.1 | |tss_id=hg_104.1 | ||
Revision as of 17:40, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 1426081 |
|---|---|
| End of the center position in the TSS region: | 1426082 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000378821.3 NM_001146685 LF383938 MA619515 |
|---|---|
| Distance: | 33 |
| Num_trans: | 6 |
| All_trans: | ENST00000378821.3:33 NM_001146685:33 LF383938:33 MA619515:33 LF357554:284 MA593131:284 |
TATA-Box annotation
| Distance to TSS: | -46 |
|---|---|
| Nearest PromoterID: | NM_001146685 |
| Entrez ID: | 643965 |
| Nearest Unigene: | Hs.729765 |
| Nearest Refseq: | NM_001146685 |
| Nearest Ensembl: | ENSG00000205116 |
| Gene Name: | transmembrane protein 88B |
| Gene Alias: | - |
| Gene Description: | transmembrane protein 88B |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
