Difference between revisions of "TSS:Hg 104409.1"
From referenceTSS
| Line 3: | Line 3: | ||
|RARP1= | |RARP1= | ||
|RIAM= | |RIAM= | ||
| − | |all_trans=ENST00000356785 | + | |all_trans=ENST00000356785.4:8 BC035636:8 AK000812:-27 AK308916:-47 ENST00000376236.9:-64 NM_019043:-64 BC054516:338 AY152730:350 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
|distance=8 | |distance=8 | ||
| − | |distance_to_tss= | + | |distance_to_tss=70 |
|end=26438417 | |end=26438417 | ||
|end_of_center_position=26438411 | |end_of_center_position=26438411 | ||
|entrez_id=54518 | |entrez_id=54518 | ||
|gc_percent=0.507463 | |gc_percent=0.507463 | ||
| − | |gene_alias=INAG1 | + | |gene_alias=INAG1{{!}}PREL1{{!}}RARP1{{!}}RIAM |
|gene_description=amyloid beta precursor protein binding family B member 1 interacting protein | |gene_description=amyloid beta precursor protein binding family B member 1 interacting protein | ||
|gene_id=54518 | |gene_id=54518 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_019043 | |nearest_refseq=NM_019043 | ||
|nearest_unigene=Hs.310421 | |nearest_unigene=Hs.310421 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=human | |species=human | ||
|start=26438404 | |start=26438404 | ||
|start_of_center_position=26438410 | |start_of_center_position=26438410 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000356785 | + | |transcript_name=ENST00000356785.4 BC035636 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104409.1 | |tss_id=hg_104409.1 | ||
Revision as of 17:49, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 26438410 |
|---|---|
| End of the center position in the TSS region: | 26438411 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000356785.4 BC035636 |
|---|---|
| Distance: | 8 |
| Num_trans: | 8 |
| All_trans: | ENST00000356785.4:8 BC035636:8 AK000812:-27 AK308916:-47 ENST00000376236.9:-64 NM_019043:-64 BC054516:338 AY152730:350 |
TATA-Box annotation
| Distance to TSS: | 70 |
|---|---|
| Nearest PromoterID: | NM_019043 |
| Entrez ID: | 54518 |
| Nearest Unigene: | Hs.310421 |
| Nearest Refseq: | NM_019043 |
| Nearest Ensembl: | ENSG00000077420 |
| Gene Name: | amyloid beta precursor protein binding family B member 1 interacting protein |
| Gene Alias: | INAG1|PREL1|RARP1|RIAM |
| Gene Description: | amyloid beta precursor protein binding family B member 1 interacting protein |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.507463 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
