Difference between revisions of "TSS:Hg 104435.1"
From referenceTSS
| Line 6: | Line 6: | ||
|TPT= | |TPT= | ||
|TPT 1= | |TPT 1= | ||
| − | |all_trans=ENST00000376215. | + | |all_trans=ENST00000376215.10:0 NM_014317:0 AK024802:0 AK223414:0 AB210838:0 LF383676:0 MA619253:0 BC063635:0 KJ902358:0 BC049211:3 LF346240:72 MA581817:72 AF118395:96 NM_001321979:-230 NM_001321978:-230 LF346241:274 MA581818:274 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-19 |
|end=26697711 | |end=26697711 | ||
|end_of_center_position=26697683 | |end_of_center_position=26697683 | ||
|entrez_id=23590 | |entrez_id=23590 | ||
|gc_percent=0.766169 | |gc_percent=0.766169 | ||
| − | |gene_alias=COQ1 | + | |gene_alias=COQ1{{!}}COQ10D2{{!}}COQ1A{{!}}DPS{{!}}SPS{{!}}TPRT{{!}}TPT{{!}}TPT 1{{!}}hDPS1 |
|gene_description=decaprenyl diphosphate synthase subunit 1 | |gene_description=decaprenyl diphosphate synthase subunit 1 | ||
|gene_id=23590 | |gene_id=23590 | ||
| − | |gene_name= | + | |gene_name=decaprenyl diphosphate synthase subunit 1 |
|gene_source=HGNC:17759 | |gene_source=HGNC:17759 | ||
|gene_symbol=PDSS1 | |gene_symbol=PDSS1 | ||
| − | |gene_synonyms=COQ1 TPT | + | |gene_synonyms=COQ1 COQ1A TPT |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hDPS1= | |hDPS1= | ||
| Line 29: | Line 29: | ||
|nearest_refseq=NM_014317 | |nearest_refseq=NM_014317 | ||
|nearest_unigene=Hs.558468 | |nearest_unigene=Hs.558468 | ||
| − | |num_trans= | + | |num_trans=17 |
|species=human | |species=human | ||
|start=26697653 | |start=26697653 | ||
|start_of_center_position=26697682 | |start_of_center_position=26697682 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000376215. | + | |transcript_name=ENST00000376215.10 NM_014317 AK024802 AK223414 AB210838 LF383676 MA619253 BC063635 KJ902358 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104435.1 | |tss_id=hg_104435.1 | ||
Revision as of 17:50, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 26697682 |
|---|---|
| End of the center position in the TSS region: | 26697683 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000376215.10 NM_014317 AK024802 AK223414 AB210838 LF383676 MA619253 BC063635 KJ902358 |
|---|---|
| Distance: | 0 |
| Num_trans: | 17 |
| All_trans: | ENST00000376215.10:0 NM_014317:0 AK024802:0 AK223414:0 AB210838:0 LF383676:0 MA619253:0 BC063635:0 KJ902358:0 BC049211:3 LF346240:72 MA581817:72 AF118395:96 NM_001321979:-230 NM_001321978:-230 LF346241:274 MA581818:274 |
TATA-Box annotation
| Distance to TSS: | -19 |
|---|---|
| Nearest PromoterID: | NM_014317 |
| Entrez ID: | 23590 |
| Nearest Unigene: | Hs.558468 |
| Nearest Refseq: | NM_014317 |
| Nearest Ensembl: | ENSG00000148459 |
| Gene Name: | decaprenyl diphosphate synthase subunit 1 |
| Gene Alias: | COQ1|COQ10D2|COQ1A|DPS|SPS|TPRT|TPT|TPT 1|hDPS1 |
| Gene Description: | decaprenyl diphosphate synthase subunit 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
