Difference between revisions of "TSS:Hg 104665.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|ICER= | |ICER= | ||
| − | |all_trans=ENST00000496626.5 | + | |all_trans=ENST00000496626.5:0 NM_001881:0 ENST00000482646.5:1 ENST00000374721.7:-24 ENST00000489388.5:34 ENST00000474362.5:-43 ENST00000374726.7:51 BC066342:51 ENST00000461968.5:76 ENST00000490460.5:87 BC017117:105 ENST00000466251.5:117 NM_001267563:129 NM_001267562:129 NM_001352467:129 NM_001352466:129 NM_001352465:129 NM_183013:129 ENST00000482633.5:176 ENST00000495960.5:191 ENST00000429130.7:219 ENST00000469949.6:230 ENST00000460270.5:245 ENST00000496019.5:284 ENST00000354759.7:290 D14825:290 NM_181571:355 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| Line 10: | Line 10: | ||
|entrez_id=1390 | |entrez_id=1390 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
| − | |gene_alias=CREM-2 | + | |gene_alias=CREM-2{{!}}ICER{{!}}hCREM-2 |
|gene_description=cAMP responsive element modulator | |gene_description=cAMP responsive element modulator | ||
|gene_id=1390 | |gene_id=1390 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:2352 | |hgnc_mgi_id=HGNC:2352 | ||
|nearest_ensembl=ENSG00000095794 | |nearest_ensembl=ENSG00000095794 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001881 |
|nearest_refseq=NM_001881 | |nearest_refseq=NM_001881 | ||
|nearest_unigene=Hs.200250 | |nearest_unigene=Hs.200250 | ||
| − | |num_trans= | + | |num_trans=27 |
|species=human | |species=human | ||
|start=35126833 | |start=35126833 | ||
|start_of_center_position=35126852 | |start_of_center_position=35126852 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000496626.5 | + | |transcript_name=ENST00000496626.5 NM_001881 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_104665.1 | |tss_id=hg_104665.1 | ||
Revision as of 17:55, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 35126852 |
|---|---|
| End of the center position in the TSS region: | 35126853 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000496626.5 NM_001881 |
|---|---|
| Distance: | 0 |
| Num_trans: | 27 |
| All_trans: | ENST00000496626.5:0 NM_001881:0 ENST00000482646.5:1 ENST00000374721.7:-24 ENST00000489388.5:34 ENST00000474362.5:-43 ENST00000374726.7:51 BC066342:51 ENST00000461968.5:76 ENST00000490460.5:87 BC017117:105 ENST00000466251.5:117 NM_001267563:129 NM_001267562:129 NM_001352467:129 NM_001352466:129 NM_001352465:129 NM_183013:129 ENST00000482633.5:176 ENST00000495960.5:191 ENST00000429130.7:219 ENST00000469949.6:230 ENST00000460270.5:245 ENST00000496019.5:284 ENST00000354759.7:290 D14825:290 NM_181571:355 |
TATA-Box annotation
| Distance to TSS: | 12 |
|---|---|
| Nearest PromoterID: | NM_001881 |
| Entrez ID: | 1390 |
| Nearest Unigene: | Hs.200250 |
| Nearest Refseq: | NM_001881 |
| Nearest Ensembl: | ENSG00000095794 |
| Gene Name: | cAMP responsive element modulator |
| Gene Alias: | CREM-2|ICER|hCREM-2 |
| Gene Description: | cAMP responsive element modulator |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
