Difference between revisions of "TSS:Hg 104679.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|ICER= | |ICER= | ||
| − | |all_trans=ENST00000487763.5:0 ENST00000473940.5:0 ENST00000488328.5:0 ENST00000356917.9:0 NM_001267569:0 NM_001267568:0 | + | |all_trans=ENST00000487763.5:0 ENST00000473940.5:0 ENST00000488328.5:0 ENST00000356917.9:0 NM_001267569:0 NM_001267568:0 NM_182719:0 NM_182720:0 NM_182718:0 NM_182717:0 D14826:0 AK290612:0 AF069065:42 U44836:42 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=4 |
|end=35195148 | |end=35195148 | ||
|end_of_center_position=35195137 | |end_of_center_position=35195137 | ||
|entrez_id=1390 | |entrez_id=1390 | ||
|gc_percent=0.432836 | |gc_percent=0.432836 | ||
| − | |gene_alias=CREM-2 | + | |gene_alias=CREM-2{{!}}ICER{{!}}hCREM-2 |
|gene_description=cAMP responsive element modulator | |gene_description=cAMP responsive element modulator | ||
|gene_id=1390 | |gene_id=1390 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:2352 | |hgnc_mgi_id=HGNC:2352 | ||
|nearest_ensembl=ENSG00000095794 | |nearest_ensembl=ENSG00000095794 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_182720 |
|nearest_refseq=NM_001881 | |nearest_refseq=NM_001881 | ||
|nearest_unigene=Hs.200250 | |nearest_unigene=Hs.200250 | ||
| − | |num_trans= | + | |num_trans=14 |
|species=human | |species=human | ||
|start=35195125 | |start=35195125 | ||
|start_of_center_position=35195136 | |start_of_center_position=35195136 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000487763.5 ENST00000473940.5 ENST00000488328.5 ENST00000356917.9 NM_001267569 NM_001267568 NM_182718 NM_182717 | + | |transcript_name=ENST00000487763.5 ENST00000473940.5 ENST00000488328.5 ENST00000356917.9 NM_001267569 NM_001267568 NM_182719 NM_182720 NM_182718 NM_182717 D14826 AK290612 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_104679.1 | |tss_id=hg_104679.1 | ||
Revision as of 17:56, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 35195136 |
|---|---|
| End of the center position in the TSS region: | 35195137 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000487763.5 ENST00000473940.5 ENST00000488328.5 ENST00000356917.9 NM_001267569 NM_001267568 NM_182719 NM_182720 NM_182718 NM_182717 D14826 AK290612 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | ENST00000487763.5:0 ENST00000473940.5:0 ENST00000488328.5:0 ENST00000356917.9:0 NM_001267569:0 NM_001267568:0 NM_182719:0 NM_182720:0 NM_182718:0 NM_182717:0 D14826:0 AK290612:0 AF069065:42 U44836:42 |
TATA-Box annotation
| Distance to TSS: | 4 |
|---|---|
| Nearest PromoterID: | NM_182720 |
| Entrez ID: | 1390 |
| Nearest Unigene: | Hs.200250 |
| Nearest Refseq: | NM_001881 |
| Nearest Ensembl: | ENSG00000095794 |
| Gene Name: | cAMP responsive element modulator |
| Gene Alias: | CREM-2|ICER|hCREM-2 |
| Gene Description: | cAMP responsive element modulator |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.432836 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
