Difference between revisions of "TSS:Hg 104681.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|ICER= | |ICER= | ||
| − | |all_trans=AF069065:-241 U44836:-241 ENST00000356917.9:-284 | + | |all_trans=AF069065:-241 U44836:-241 ENST00000356917.9:-284 ENST00000488328.5:-298 NM_182719:-298 NM_182720:-298 NM_182718:-298 NM_182717:-298 AK290612:-298 ENST00000487763.5:-304 ENST00000473940.5:-304 NM_001267569:-304 NM_001267568:-304 D14826:-304 NM_001352445:409 NM_001352446:409 ENST00000488741.5:424 ENST00000474931.5:461 NM_182721:461 NM_001267570:461 NM_182724:461 NM_182723:461 AK289379:461 AK291566:463 ENST00000468236.5:468 ENST00000344351.5:476 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance=-241 | |distance=-241 | ||
| − | |distance_to_tss= | + | |distance_to_tss=303 |
|end=35195441 | |end=35195441 | ||
|end_of_center_position=35195436 | |end_of_center_position=35195436 | ||
|entrez_id=1390 | |entrez_id=1390 | ||
|gc_percent=0.432836 | |gc_percent=0.432836 | ||
| − | |gene_alias=CREM-2 | + | |gene_alias=CREM-2{{!}}ICER{{!}}hCREM-2 |
|gene_description=cAMP responsive element modulator | |gene_description=cAMP responsive element modulator | ||
|gene_id=1390 | |gene_id=1390 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:2352 | |hgnc_mgi_id=HGNC:2352 | ||
|nearest_ensembl=ENSG00000095794 | |nearest_ensembl=ENSG00000095794 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_182720 |
|nearest_refseq=NM_001881 | |nearest_refseq=NM_001881 | ||
|nearest_unigene=Hs.200250 | |nearest_unigene=Hs.200250 | ||
| − | |num_trans= | + | |num_trans=26 |
|species=human | |species=human | ||
|start=35195430 | |start=35195430 | ||
Revision as of 17:56, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 35195435 |
|---|---|
| End of the center position in the TSS region: | 35195436 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AF069065 U44836 |
|---|---|
| Distance: | -241 |
| Num_trans: | 26 |
| All_trans: | AF069065:-241 U44836:-241 ENST00000356917.9:-284 ENST00000488328.5:-298 NM_182719:-298 NM_182720:-298 NM_182718:-298 NM_182717:-298 AK290612:-298 ENST00000487763.5:-304 ENST00000473940.5:-304 NM_001267569:-304 NM_001267568:-304 D14826:-304 NM_001352445:409 NM_001352446:409 ENST00000488741.5:424 ENST00000474931.5:461 NM_182721:461 NM_001267570:461 NM_182724:461 NM_182723:461 AK289379:461 AK291566:463 ENST00000468236.5:468 ENST00000344351.5:476 |
TATA-Box annotation
| Distance to TSS: | 303 |
|---|---|
| Nearest PromoterID: | NM_182720 |
| Entrez ID: | 1390 |
| Nearest Unigene: | Hs.200250 |
| Nearest Refseq: | NM_001881 |
| Nearest Ensembl: | ENSG00000095794 |
| Gene Name: | cAMP responsive element modulator |
| Gene Alias: | CREM-2|ICER|hCREM-2 |
| Gene Description: | cAMP responsive element modulator |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.432836 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
