Difference between revisions of "TSS:Hg 104762.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=BX648149:0 BC014161:-28 ENST00000374435.3 | + | |all_trans=BX648149:0 ENST00000361807.8:-17 NM_145312:-17 BC014161:-28 ENST00000374435.3:-29 ENST00000480678.1:-36 ENST00000430885.5:-36 NM_001318141:-48 NM_001318142:-48 NM_001318143:-48 NM_001318140:-48 AK299707:-48 AK074679:-48 |
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=31 |
|end=43606484 | |end=43606484 | ||
|end_of_center_position=43606470 | |end_of_center_position=43606470 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:23440 | |hgnc_mgi_id=HGNC:23440 | ||
|nearest_ensembl=ENSG00000198298 | |nearest_ensembl=ENSG00000198298 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_145312 |
|nearest_refseq=NM_145312 | |nearest_refseq=NM_145312 | ||
|nearest_unigene=Hs.147440 | |nearest_unigene=Hs.147440 | ||
| − | |num_trans= | + | |num_trans=13 |
|species=human | |species=human | ||
|start=43606454 | |start=43606454 | ||
Revision as of 17:58, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 43606469 |
|---|---|
| End of the center position in the TSS region: | 43606470 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BX648149 |
|---|---|
| Distance: | 0 |
| Num_trans: | 13 |
| All_trans: | BX648149:0 ENST00000361807.8:-17 NM_145312:-17 BC014161:-28 ENST00000374435.3:-29 ENST00000480678.1:-36 ENST00000430885.5:-36 NM_001318141:-48 NM_001318142:-48 NM_001318143:-48 NM_001318140:-48 AK299707:-48 AK074679:-48 |
TATA-Box annotation
| Distance to TSS: | 31 |
|---|---|
| Nearest PromoterID: | NM_145312 |
| Entrez ID: | 220992 |
| Nearest Unigene: | Hs.147440 |
| Nearest Refseq: | NM_145312 |
| Nearest Ensembl: | ENSG00000198298 |
| Gene Name: | zinc finger protein 485 |
| Gene Alias: | - |
| Gene Description: | zinc finger protein 485 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
